| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2017 |
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| Symbol | |
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| ID | 3240545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 2034917 |
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| End bp | 2036293 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637168703 |
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| Product | amino acid permease family protein |
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| Protein accession | YP_189573 |
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| Protein GI | 57865380 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000181843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC AACTACAAAG AGAGTTGAAT AATAGGCATA TTCAATTAAT TGCTATAGGT
GGCGCTATAG GAACTGGTTT ATTTTTAGGT TCAGGACAAA CAATTTCTCT AACCGGACCT
TCATTACTCT TTACTTACAT GTTGATAGGT ATAGTGTTAT TTGCTTTTAT GAGAGCTCTT
GGTGAATTAT TATTAAGTAA CTCTAAATTT AATTCATTCG TAGATATTGC AAATGAATAC
CTTGGTCCAT TTGGTGGATT TGTAATTGGG TGGACCTATT GGGTTTGTTG GATTGTCTCT
AGCATGTCGG ACCTCACTGC GATGGGACAA TATTTTGCTT ATTGGTATCC ACAAGTCCCA
CACTGGTTGA CAGTACTATT TATTGTACTC CTACTTATAT CATTTAATTT GCTTGGCGCC
AGATTATTTG GAGAACTTGA ATTTTGGTTT TCTATAATTA AAGTCGTTAC AATTATTACG
ATGGTTATTG TAGGTTTAGT TCTGATTTTT TTATCATTTA AAACAGAATA TGGACATGCT
TCTTTTGGTA ATTTGATACA TCATGGCGGG ATGTTTCCAC ATGGTGCAGC TGGATTTTTA
ATGTCCTTCC AAATTGCTGT ATATTCATTT ATCGGTATAG AACTTATAGG AGTCACAGCT
GGCGAAACAA AAAATCCAGA AAAAACAATT CCTAAAGCAA TAAATAACGT TCCTATACGA
ATTTTATTAT TTTATATAGG TGGTTTACTT GTAATCATGT CTGTCATTCC ATGGTTTAAA
GTTGATCCTG ATAGTAGTCC GTTTGTTAAA TTATTCACAC TAATTGGTGT TCCCTTTGCT
GCTGGCATAG TTAATTTTGT TGTTTTAACA GCAGCAGCAT CTGCAACAAA TAGCGGAATA
TATTCTAATA GTAGAATTTT ATTTGGTTTA GCGAAACAAG GTTTAGGTCC TAAAGTATTG
ACAAAAACTA ATTCTAATGG TGTACCTTAT CTCTCAATGT TAGTATCTTC AATAACATTG
TTAATCGCAG CTTTATTAAA TTTTGTTTTC CCAGATGCTA TTAAATTATT TATTTATGTA
ACGACACTAT CTACCGTCCT ATTCCTTGTA GTATGGGGAA TGATTATCGT TTCTTACATC
GCATACGTAA AGAAGAATCC TGAACAACAT CAATCAAGTG CATTTAAATT ATGGGGCGGA
AAAATTATTG CCTATATTGT GTTATCTTTT TTCATATTTA TCTTTATTTT GCTATTCTTT
AGCAAAGATA CTAGAGTAGC TATTTTTATT TCACCGTTAT GGTTTATCTT CTTGTTCTTT
TATTATAAGA AATACAAGAA TAATGCTGAA TCTTTAGCCG ATAGACAGCG ACATTAA
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| Protein sequence | MAKQLQRELN NRHIQLIAIG GAIGTGLFLG SGQTISLTGP SLLFTYMLIG IVLFAFMRAL
GELLLSNSKF NSFVDIANEY LGPFGGFVIG WTYWVCWIVS SMSDLTAMGQ YFAYWYPQVP
HWLTVLFIVL LLISFNLLGA RLFGELEFWF SIIKVVTIIT MVIVGLVLIF LSFKTEYGHA
SFGNLIHHGG MFPHGAAGFL MSFQIAVYSF IGIELIGVTA GETKNPEKTI PKAINNVPIR
ILLFYIGGLL VIMSVIPWFK VDPDSSPFVK LFTLIGVPFA AGIVNFVVLT AAASATNSGI
YSNSRILFGL AKQGLGPKVL TKTNSNGVPY LSMLVSSITL LIAALLNFVF PDAIKLFIYV
TTLSTVLFLV VWGMIIVSYI AYVKKNPEQH QSSAFKLWGG KIIAYIVLSF FIFIFILLFF
SKDTRVAIFI SPLWFIFLFF YYKKYKNNAE SLADRQRH
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