Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2007 |
Symbol | gpmA |
ID | 3240563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2023860 |
End bp | 2024546 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637168693 |
Product | phosphoglyceromutase |
Protein accession | YP_189563 |
Protein GI | 57865362 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.980776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAAAT TAATACTATG TCGGCACGGA CAAAGTGAAT GGAATGCGAA AAATTTATTT ACAGGTTGGG CCGATGTCAA ACTATCAAAA CAAGGAATTG AAGAGGCGCA ATCAGCAGGT AAAAAAATTT ACGGCAATCA AATTGAAATT GATATTGCGT TTACCTCTTT ACTCACTAGA GCTTTAGAAA CAACACAATA TATTTTAGCA GGTTCTGACC AACAGTGGAT TCCTGTTTAT AAAAGTTGGC GTTTAAATGA ACGACATTAT GGTGGTTTAC AAGGTTTAAA TAAAGATGAT GCGAGAAAAA AATGGGGGGA AGATCAGGTG CATCAATGGA GACGCTCATA TGATGTACGT CCGCCTAGAG AAAGTGAAGA ACAACGAGAA GCATATTTAA AAAATCGTCG TTATCAACAT ATTGATCACC GTATGATGCC TTATTGTGAA AGTTTGAAAG ATACATTAGA ACGAGTTGTT CCGTTCTGGA CTGATCATAT TTCACAACAC CTATTAGATG ATAAAACTGT ACTTGTTTCG GCCCACGGAA ATTCCATTCG CGCATTAATT AAGTATTTGG AAGGTTTATC AGAAGAAGAT ATCGTCGGAT ATGAAATTAA AACGGGTGCA CCGCTAGTAT ATGAACTCAC AGATGATTTA GTTGTTAAGG ATAAATATTA TTTATAA
|
Protein sequence | MPKLILCRHG QSEWNAKNLF TGWADVKLSK QGIEEAQSAG KKIYGNQIEI DIAFTSLLTR ALETTQYILA GSDQQWIPVY KSWRLNERHY GGLQGLNKDD ARKKWGEDQV HQWRRSYDVR PPRESEEQRE AYLKNRRYQH IDHRMMPYCE SLKDTLERVV PFWTDHISQH LLDDKTVLVS AHGNSIRALI KYLEGLSEED IVGYEIKTGA PLVYELTDDL VVKDKYYL
|
| |