| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2004 |
|---|
| Symbol | |
|---|
| ID | 3240560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2021867 |
|---|
| End bp | 2022586 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637168690 |
|---|
| Product | amino acid ABC transporter, permease protein |
|---|
| Protein accession | YP_189560 |
|---|
| Protein GI | 57865359 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTAA ACCTGAATAA TGAACAACAA CATGCATTAG ATGCAGCCAA ACAAGCATTT
GGTCCAATGT TAGAGGGATT GGTGAAATAC TCAATCCCTA TTACTTTGGT CACTTTCATT
CTAGGTTTAA TCATTGCATT GTTTACTGCA CTTATGCGTA TATCAACCAG TAAATTGCTT
AGAGGTATTG CGCGTGTCTA TGTATCAATT ATTCGTGGTA CACCTATGAT TGTACAGTTA
TTTATTATTT TTTACGGTAT ACCGGAGCTT GGAAGATTGG TAACTAACAA TGCTGATAAT
CAATGGACAC TTGCACCTGT TATTGCTGCA GTCATTGGTT TATCTTTAAA TGTTGGTGCT
TATGCTTCTG AAATTATACG AGGAGGTATA TTGTCTATTC CTAAAGGACA AACAGAAGCG
GCTTATTCTA TAGGTATGAA CTATAGACAA ACTGTGCAAC GTATTATCTT ACCACAAGCT
ATTCGTGTAT CTATACCAGC ACTAGGAAAC ACATTTTTAA GTTTAATTAA AGATACATCA
TTACTTGGAT TTATTCTTGT TGCAGAAATG TTTAGAAAGG CACAAGAAGT TGCTTCGACA
ACGTATGAGT ATCTAACTAT TTATTTGTTA GTAGCTTTAA TGTATTGGGT CGTATGTTTT
GTCATCTCAA TTATCCAAGG ATGGTATGAA TCACGCATTG AAAGAGGGTA TCGCTCATGA
|
|---|
| Protein sequence | MFLNLNNEQQ HALDAAKQAF GPMLEGLVKY SIPITLVTFI LGLIIALFTA LMRISTSKLL
RGIARVYVSI IRGTPMIVQL FIIFYGIPEL GRLVTNNADN QWTLAPVIAA VIGLSLNVGA
YASEIIRGGI LSIPKGQTEA AYSIGMNYRQ TVQRIILPQA IRVSIPALGN TFLSLIKDTS
LLGFILVAEM FRKAQEVAST TYEYLTIYLL VALMYWVVCF VISIIQGWYE SRIERGYRS
|
|---|
| |