| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1990 |
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| Symbol | nirB |
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| ID | 3241539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2009063 |
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| End bp | 2011468 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637168676 |
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| Product | nitrite reductase [NAD(P)H], large subunit |
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| Protein accession | YP_189546 |
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| Protein GI | 57865464 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC AAAAACTTGT AATGATTGGT AATGGTATGG CAGGTTTAAG AACGATAGAA
GAGATTTTAG AACGTTCACA ATCACAATTT GATATTACTA TTATTGGGAA AGAACCTTAT
CCGAACTATA ACAGAATTAT GTTATCCAAT ATTTTACAGA AGAAAATGAC CGTCGAAGAT
ACAATTATGA ATCCTTATGA TTGGTATCAA GAGAATAATA TTGAACTTAT AAATAATGAT
CCAGTGGAAA AAGTTGATAA AGAAAACAAA ATAGTTACTA CTTCTAAAGG TATTGAAGTA
GAGTATGACA TTTGTATTTT CGCTACTGGA TCAAAAGCTT TTGTATTACC TATACCAGGT
TCAAATCTTC CTAGTGTCAT TGGATGGCGA ACAATTGATG ATACAAATAA AATGATTGAA
ATTGCCCAAA CGAAAAAACG CGCAGTTGTC ATTGGTGGAG GTCTTCTAGG CTTAGAGTGT
GCCAGAGGAC TTCTAGATCA AGGAATGGAA GTGACAGTTC TTCATTTAGC TGATTGGCTC
ATGGAAATGC AATTGGATCG TAAAGCCGGA GAAATGCTTA AAGCGGATTT AGAAAAGCAA
GGTATGAAGA TTGAACTTCA AGCAAATTCT AAAGAAATCA TTGGTGATAA AGATGTTGAA
GCTATTAAAT TAGCTGACGG TCGGGTGATT GAAACAGATT TAGTAGTTAT GGCTGTTGGT
ATCAGACCTT ATACTGAAGT TGCTAAAGAT AGTGGATTAG ATGTCAATAG AGGTATTGTT
GTAAATGATT ATATGCAAAC ATCTGATTCT CATATTTATG CAGTCGGTGA ATGTGCCGAA
CATGATGGGA AAGTTTATGG ATTGGTGGCG CCACTTTATG AACAAGGCAA AGTGCTAGCA
GATTATTTAA CTGGTAAAGA AACAAAAGGT TATAAAGGAT CTACTACTTT CACTTCACTT
AAAGTATCTG GTTGTGATTT ATATAGTGCA GGGCAAATTG TTGAAGATGA AGATGTCCAT
GGTGTGGAAA TTTTTAATAG TGTCGACAAT ATCTACAAAA AAGTGTATTT AAGTCAGGGT
CAAGTCGTTG GTGCTGTCTT GTATGGTGAT ACTGATGATG GATCACGATT TTATAATATG
ATGAAAAAAC ATGAAACGCT TGAAGATTAT ACACTTGTTT CTTTATTGCA TAAAGGTGAT
GAAGATGCGG GGACATCTAT TGCTGATATG TCTGATGATG AAACGATTTG TGGATGTAAT
GGTGTTGATA AAGGAACAAT CGTCAATGCT ATTACAAGTA AAGGTTTAAC GTCTGTAGAT
GAAGTGACTA AAGCAACAAA AGCAGGTAAT TCATGTGGTA AGTGTAAAGG TCAAATCGGT
GAGTTATTAC AATATACATT AGGTGACGAC TTTATTGCTG CAAAACCAAC AGGTATTTGT
CCATGTACTG ATTTAACAAG AGACCAAATT GTAACTCAAA TCAGGGCTAA AAATCTCAAA
TCATCAAAAG AAGTACGACA CGTTCTTGAT TTCAAAGATA AAGATGGTTG TCCTAAATGT
CGACCTGCAA TTAATTATTA TTTAAATATG GTTTATCCTT TTGAACATCG AGACGAAAAA
GATTCTCGCT TCGCTAATGA AAGATATCAT GCAAATATAC AAAATGATGG TACTTTCTCA
GTGATTCCTC AAATGCGCGG TGGTGTTACA GATGCTGACC AACTCATTCG ATTAGGAGAA
GTTGCTAAAA AGTATAACGT ACCACTTGTT AAAGTAACAG GTTCGCAACG TGTAGGTTTA
TATGGATTGA AGAAAGAAGA ATTACCACAA GTTTGGAAAG ATTTAGGAAT GCGTTCTGCT
TCTGCTTATG GTAAAAAGAC GCGTTCTGTT AAAAGTTGCG TTGGTAAAGA GTTTTGTCGT
TTTGGTACAC AATACACAAC TCGACTAGGA ATAAGACTTG AAAAAACATT TGAATATATT
GATACACCTC ATAAATTTAA AATGGGAGTA TCAGGTTGTC CGAGAAGTTG TGTAGAGTCT
GGTGTTAAAG ATTTTGGCGT CATATCTGTT GAAAATGGCT ACCAAATATT TATCGGAGGT
AATGGTGGTA CTGATGTTAC TGTAGGTAAA TTGTTAACGA CAGTTGAAAC CGAAGATGAA
GTGATTCAAT TATGTGGTGC CCTCATGCAG TATTACAGAG AAACAGGTGT TTACGCTGAA
AGAACAGCAC CATGGTTAGA ACGTATGGGC TTTGAAAATG TCAAGAATGT CTTATTAAAT
CAAGAAAAGC AAAAAGAACT GTATTTAAGA ATTATGGAAG CCAAAAAAGC TGTTGAGAAT
GAACCATGGG AAACTATTGT TGAAAATAAA GAAGCACAAA AAATCTTTGA AGTTGAGAAG
GTGTAA
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| Protein sequence | MAKQKLVMIG NGMAGLRTIE EILERSQSQF DITIIGKEPY PNYNRIMLSN ILQKKMTVED
TIMNPYDWYQ ENNIELINND PVEKVDKENK IVTTSKGIEV EYDICIFATG SKAFVLPIPG
SNLPSVIGWR TIDDTNKMIE IAQTKKRAVV IGGGLLGLEC ARGLLDQGME VTVLHLADWL
MEMQLDRKAG EMLKADLEKQ GMKIELQANS KEIIGDKDVE AIKLADGRVI ETDLVVMAVG
IRPYTEVAKD SGLDVNRGIV VNDYMQTSDS HIYAVGECAE HDGKVYGLVA PLYEQGKVLA
DYLTGKETKG YKGSTTFTSL KVSGCDLYSA GQIVEDEDVH GVEIFNSVDN IYKKVYLSQG
QVVGAVLYGD TDDGSRFYNM MKKHETLEDY TLVSLLHKGD EDAGTSIADM SDDETICGCN
GVDKGTIVNA ITSKGLTSVD EVTKATKAGN SCGKCKGQIG ELLQYTLGDD FIAAKPTGIC
PCTDLTRDQI VTQIRAKNLK SSKEVRHVLD FKDKDGCPKC RPAINYYLNM VYPFEHRDEK
DSRFANERYH ANIQNDGTFS VIPQMRGGVT DADQLIRLGE VAKKYNVPLV KVTGSQRVGL
YGLKKEELPQ VWKDLGMRSA SAYGKKTRSV KSCVGKEFCR FGTQYTTRLG IRLEKTFEYI
DTPHKFKMGV SGCPRSCVES GVKDFGVISV ENGYQIFIGG NGGTDVTVGK LLTTVETEDE
VIQLCGALMQ YYRETGVYAE RTAPWLERMG FENVKNVLLN QEKQKELYLR IMEAKKAVEN
EPWETIVENK EAQKIFEVEK V
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