| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1989 |
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| Symbol | nirD |
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| ID | 3241538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2008746 |
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| End bp | 2009060 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637168675 |
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| Product | nitrite reductase [NAD(P)H], small subunit |
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| Protein accession | YP_189545 |
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| Protein GI | 57865463 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCTA AAGAAAAGAT TAAAGTTACA ACAATGAATG AAATGATTCC TCAAATAGGC
AAAAAAGTAG TTGTAAACGA AAAAGAAATA GGTATTTTTC TCACAGATAA TGGTGATTTA
TATGCCATTG GAAATATATG TCCACATAAA GAAGGACCGT TGTCTGAAGG GACTGTAAGT
GGTGATTATG TTTACTGTCC GTTACACGAT CAAAAAATAG CTTTAAAAAC TGGAGAAGTA
CAACAACCTG ATACAGGATG TGTAGAGACA TACGAAGTAG AAGTTATTGA TGGAGATATT
TACTTATGTC TATAA
|
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| Protein sequence | MKAKEKIKVT TMNEMIPQIG KKVVVNEKEI GIFLTDNGDL YAIGNICPHK EGPLSEGTVS
GDYVYCPLHD QKIALKTGEV QQPDTGCVET YEVEVIDGDI YLCL
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