Gene SERP1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1980 
Symbol 
ID3242432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1997556 
End bp1998719 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content35% 
IMG OID637168666 
Productnitrite extrusion protein 
Protein accessionYP_189536 
Protein GI57865447 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.428351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGA AAAAGGGTGT TTCTCAGCTT ACGTTACAGA CATTGAGTTT GGTCGCAGGC 
TTTATGGCAT GGAGTATCAT TTCTCCATTA ATGCCATTTA TTTCACAAGA TGTTGATATT 
TCTCCAGGAC AAATATCTGT CATTTTAGCT ATTCCTGTTA TTTTAGGTTC TGTACTACGT 
GTACCATTTG GGTACTTAAC TAACATTGTA GGAGCGAAAT GGGTGTTTTT CTGGAGTTTT 
ATTGTACTAT TACTTCCAAT TTTTCTTTTA GGTCAAGCTC AATCACCCGG TATGCTAATG 
TTATCAGGAT TCTTTCTAGG AATTGGTGGC GCAATTTTTT CAGTAGGTGT TACTTCAGTA 
CCTAAATACT TTTCAAAAGA CAAAGTTGGT TTAGCAAATG GTATATATGG TGTAGGTAAT 
ATTGGTACTG CAGTTTCATC ATTTTGTGCC CCAGTGTTAG CAGGTGCAAT TGGCTGGCAA 
AATACAGTTC GTAGTTATTT AATTATTCTA AGTATATTTG CAATTTTAAT GTTTTTTTTA 
GGAGATAAAA ATGAGCCGAA AGTGAAGATT CCTTTGATGG CTCAAGTCAA AGACCTATCT 
AAGAATTATA AGTTGTATTA TTTAAGTTTG TGGTATTTTA TTACTTTTGG AGCTTTTGTG 
GCTTTTGGGA TTTTTTTACC GAACTTTCTA GTTGATCATT TTAGTATTGA TAAAGTGGAT 
GCAGGTATTC GTTCAGGTAT ATTTATAGCA CTAGCGACGT TCTTAAGACC GGTTGGTGGT 
GTTATAGGTG ATAAATTTAA TGCAGTACAA GCGCTTATCA TCGACTTCGT GATAATGATT 
ATTGGTGCGC TTATATTAAG CTTATCTAGT CATATTGTTC TGTTTACGAT AGGCTGTTTA 
GCAATTAGTA TCTGTGCAGG TATAGGTAAT GGTTTAATAT TTAAATTAGC ACCTTCATAC 
TTTTCTAAAG AAGCAGGTTC AGCGAATGGT ATTGTATCCA TGATGGGAGG ACTAGGCGGT 
TTCTTCCCAC CACTGGTGAT TACTTTTGTA ACGAGTATCA CTGGTTCAAG TCATCTCGCT 
TTCTTCTTCT TGGCTATATT TGGTGTAATT GCTCTTATTA CAATGATTCA TTTAAATAAA 
AAAGAGAAAG CTATTCGTAT ATAA
 
Protein sequence
MNMKKGVSQL TLQTLSLVAG FMAWSIISPL MPFISQDVDI SPGQISVILA IPVILGSVLR 
VPFGYLTNIV GAKWVFFWSF IVLLLPIFLL GQAQSPGMLM LSGFFLGIGG AIFSVGVTSV 
PKYFSKDKVG LANGIYGVGN IGTAVSSFCA PVLAGAIGWQ NTVRSYLIIL SIFAILMFFL 
GDKNEPKVKI PLMAQVKDLS KNYKLYYLSL WYFITFGAFV AFGIFLPNFL VDHFSIDKVD 
AGIRSGIFIA LATFLRPVGG VIGDKFNAVQ ALIIDFVIMI IGALILSLSS HIVLFTIGCL 
AISICAGIGN GLIFKLAPSY FSKEAGSANG IVSMMGGLGG FFPPLVITFV TSITGSSHLA 
FFFLAIFGVI ALITMIHLNK KEKAIRI