| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1960 |
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| Symbol | tagF |
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| ID | 3241085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1978254 |
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| End bp | 1980419 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637168648 |
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| Product | teichoic acid biosynthesis protein F |
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| Protein accession | YP_189518 |
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| Protein GI | 57865405 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.867848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC TGACAATTAT TGTCACGTAT TATAATGCGG AGGAATACAT CACAGGTTGC
TTAGAGAGTA TTAAGCAACA ACGTACACAA GATTTTAATT TGATTATTGT GAATGATGGG
TCGACAGACC AAAGTAAAAA ATTAATGGAT GAAGCTATTA AAGACTATGA TAAAAACATT
CGATTTATCG ATTTAGATGA AAATAGTGGT CATGCACATG CGCGTAATAT TGCATTAGAA
GAAGTAGAAA CACCTTACTT TATGTTTTTA GATGCAGATG ATGAATTAGC TTCTTATGCA
ATCACGTTTT ACTTAGAAAA GTTTAATAAT ACTGATGGTT TAATTGCTCC AATACATTCT
TTTACTACAC AACGTCCGCA ATTTGTTGAT TTAGATCGAG TAAGGGTTGA ATACTTTAAT
GCCAAAGAGA ATATTAATTC ATTTTTAAGA AAACAGTCAG CTTGTAACAT TATTTTTAGA
ACAGCTATTG TCAGGGCGCA TCATATTCGA TTTAATGAAA ATTTAAATAC ATATGTGGAT
TGGTCATTTG TTCTTGAATA TATGAAGTAT GTAAATAAGT TTGTACGTAT TTTTAACTTC
CCATTTTATT TCCGTGGGGA AGTCTATGAT CCATTTGAAA CACTTACATT AAGTGAACAA
AATTTTGATA TTTTATTTAA AGATTACGTC AACAGCTTTT ATGATGCCAT TAAACGAGCA
ACAAATCCAA AAGTTAGAGA ATTTATTGTC ACTAAAATGG GAAATAAAAT TGCTAATGAA
TTTGAACCAA CTCGATATGA TATTAATGAA CGCTATCAAA CACATAAGGA TACGCTTGTT
GAATTATCGA AATTTTTACA TGTACATTTA GTTAAAAACC AAAAGCTAAT AAATAAAATT
GAAACAATTT TGTTAATGAA TAATGAAACT GATAAAGCTT TTAAAGTTAA TCAATTTAGA
AAAACGTTGC GACATGTTAA AAATATTGTT CTAAGAAGAA AAAATAAAGA ACGTTCATTG
TATGATTTAA CAGATAAAGA AGATAATGTT AAACCGAAAA CGATTGTCTT TGAATCGTTC
GGTGGTAAGA ATTACAGTGA TAGTCCAAAG TATATTTATG AATATATGCA AAAGTATTAT
CCTAATTATC GCTATATATG GTCATTTAAG AATCCCGATA AAAATGTCGT ACCGGGTAGT
GCTGAAAAGG TTAAGCGTAA TTCAGCAGAG TATTATCAAG CATACTCGGA AGCAAGTCAT
TGGGTATCAA ATGCGCGTAC ACCACTTTAT TTAAATAAAA AAGAAAATCA AACGTACATT
CAAACTTGGC ACGGTACACC ATTAAAACGT TTAGCGAATG ATATGAAAGT GGTACGTATG
CCGGGTACTA CGACACCAAA GTATAAGCGT AATTTTAATC GTGAAACATC ACGTTGGGAT
TATTTAATTT CGCCAAATAG ATATTCAACT GAAATATTTA GAAGTGCTTT TTGGATGGAT
GAAGAAAGAA TATTAGAGAT AGGTTATCCA AGAAATGATG TATTAGTTAA TAGAGCCAAT
GATCAAGAGT ATTTAGATGA AATTAGAACT CACTTAAATT TACCTAGTGA TAAAAAGGTT
ATTATGTATG CTCCGACATG GAGAGACGAT GAATTTGTGA GTAAAGGAAA ATATTTGTTT
GAATTAAAAA TTGATTTAGA CAACCTTTAT AAAGAACTCG GAGATGATTA TGTGATTTTA
TTACGCATGC ATTATCTCAT TTCTAACGCA CTTGATTTAT CTGGTTATGA AAATTTTGCA
ATTGATGTTT CAAACTATAA TGACGTCTCT GAATTATTTT TAATAAGTGA TTGTTTAATT
ACAGACTATT CATCAGTAAT GTTTGATTAT GGTATTTTAA AACGCCCTCA ATTTTTCTTT
GCATATGATA TAGACAAATA TGATAAGGGA TTACGAGGAT TCTATATGAA TTATATGGAA
GATTTACCAG GACCTATTTA TACAGAACCA TATGGCCTAG CTAAAGAACT AAAGAATTTA
GATAAAGTGC AACAGCAATA TCAAGAAAAA ATAGATGCAT TTTATGATAG ATTTTGCTCT
GTAGATAATG GTAAGGCATC TCAATATATT GGGGATTTAA TTCATAAGGA TATCAAGGAA
CAATGA
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| Protein sequence | MNKLTIIVTY YNAEEYITGC LESIKQQRTQ DFNLIIVNDG STDQSKKLMD EAIKDYDKNI
RFIDLDENSG HAHARNIALE EVETPYFMFL DADDELASYA ITFYLEKFNN TDGLIAPIHS
FTTQRPQFVD LDRVRVEYFN AKENINSFLR KQSACNIIFR TAIVRAHHIR FNENLNTYVD
WSFVLEYMKY VNKFVRIFNF PFYFRGEVYD PFETLTLSEQ NFDILFKDYV NSFYDAIKRA
TNPKVREFIV TKMGNKIANE FEPTRYDINE RYQTHKDTLV ELSKFLHVHL VKNQKLINKI
ETILLMNNET DKAFKVNQFR KTLRHVKNIV LRRKNKERSL YDLTDKEDNV KPKTIVFESF
GGKNYSDSPK YIYEYMQKYY PNYRYIWSFK NPDKNVVPGS AEKVKRNSAE YYQAYSEASH
WVSNARTPLY LNKKENQTYI QTWHGTPLKR LANDMKVVRM PGTTTPKYKR NFNRETSRWD
YLISPNRYST EIFRSAFWMD EERILEIGYP RNDVLVNRAN DQEYLDEIRT HLNLPSDKKV
IMYAPTWRDD EFVSKGKYLF ELKIDLDNLY KELGDDYVIL LRMHYLISNA LDLSGYENFA
IDVSNYNDVS ELFLISDCLI TDYSSVMFDY GILKRPQFFF AYDIDKYDKG LRGFYMNYME
DLPGPIYTEP YGLAKELKNL DKVQQQYQEK IDAFYDRFCS VDNGKASQYI GDLIHKDIKE
Q
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