Gene SERP1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1956 
Symbol 
ID3242285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand+ 
Start bp1972366 
End bp1973511 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content32% 
IMG OID637168644 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_189514 
Protein GI57865401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGT TCACATTTTT TATGCATAAT ATTTATGCAA TGGGCGGAAC GGTAAAGTCG 
GTGACACAAC TTGCAAATAC ACTGGCAGAA AAAGGACATC CTGTAACAAT TATTTCAGTT 
TTTAGAGGCG CAGACTCTCC ATATTTTGAA TTACATTCAG CAATAAAAGT TAAAGTCGTA 
GTGGACTATC GCTTAAAGCT TAAAAATACT AGAGCTATTA CGGCAAATCG TATCAAAAAG 
TATACCCCCT TTTTAAATAC AAAAGTGATT TCTCAATTTG AGCCAGGTAA AAGTCAGTTT 
TCGAGTTATG TAGAGAAAAA AATGATTAAA GCAATCAGGC ATACTAAAAC TGATGTACTC 
GTTGGAACAA GAGCTAGCTT TAATATTCTC ATTTCTAAAT ATGCTAAAGC TGAAATAGTG 
ACCATCGCAA TGGAACATAT GAATTTTGAT GCTCACCCTG ATCAGTATCA AAAGGAAATT 
ATTGCTGCGT ACCGTAATAT CAATAAGATT ACAACGTTAA CTGTCGCAGA CCAGCAAAAA 
TATCAATCAC AACTTAAAAC TCCTGTATAC GTTATACCTA ATATGGTTAC CGAAAAAAGA 
ATTGCTGCTC CAAAGAAAAA TCGTATTATT AGCGCCGGAC GTTTAGAATA TGAAAAAGGG 
TATGATTTAT TATTAGAGAG TATTCGTTTA ATACAAGAAG ACTTGCGTCA ATTGAATTAT 
GACGTTCACA TCTATGGTTC TGGTAGTAAG AAAACATCAC TTGTTGACTT TATTAATCAA 
TATCATTTAA ATGATTTGAT TAAAATATAT GAGCCAACGC AAGAATTAAA TAATAAACTT 
GCACAAAGTA AAATCGTTGT TGTACCTTCA CGCAATGAAG GTTTCGGAAT GATTATTTTA 
GAGGCAATGG TGCAAGATAA TATAGTAATA AGTTTTGAAG GCAATGTAGG GCCAGATTCA 
ATCATTAACA ACGGAGATAA TGGTTATTTA GTAAACTATG AAAATGTGTC TGAACTTGCA 
AAACGTATCG ATTTAACAAC ACAACATTAT AATGAGTTAG ATCACATCAT TGAAAATAGT 
AAAGATACGT TGAAACAATT TAGTCCGGAT CATATATATC AATTATTTAT GTCTATGTTT 
AAATAA
 
Protein sequence
MKSFTFFMHN IYAMGGTVKS VTQLANTLAE KGHPVTIISV FRGADSPYFE LHSAIKVKVV 
VDYRLKLKNT RAITANRIKK YTPFLNTKVI SQFEPGKSQF SSYVEKKMIK AIRHTKTDVL 
VGTRASFNIL ISKYAKAEIV TIAMEHMNFD AHPDQYQKEI IAAYRNINKI TTLTVADQQK 
YQSQLKTPVY VIPNMVTEKR IAAPKKNRII SAGRLEYEKG YDLLLESIRL IQEDLRQLNY 
DVHIYGSGSK KTSLVDFINQ YHLNDLIKIY EPTQELNNKL AQSKIVVVPS RNEGFGMIIL 
EAMVQDNIVI SFEGNVGPDS IINNGDNGYL VNYENVSELA KRIDLTTQHY NELDHIIENS 
KDTLKQFSPD HIYQLFMSMF K