| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1952 |
|---|
| Symbol | |
|---|
| ID | 3242571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1967206 |
|---|
| End bp | 1968258 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637168640 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_189510 |
|---|
| Protein GI | 57865388 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAG CTTGGAAAGA GATTAAATTT TATAAGTTCA GATTTATATT AATCATGTTC
ATTATTTTTC TAATGGCGAT TATGGTTTTA TTTATCAGTG GACTTGCTCA AGGCCTAGCA
CGAGAAAATA TATCAATATT TGATCAAATT AAAGGTAATC AATTTGTTGT TCAAAAAATG
AAAGAACCAC AATTAGAAAA ATCTATTCTA TCACGAAGTA AACAAGACAA TATTTCAAAA
ATTATTGATG AAAAACCTTT TAAAATGGCA GGTAAAACTT TCAAAATCAA TGGAAACGAA
GAAAACGTGA TGGCTATAAA TAGCGTGAAA AATCATCAGC CAAATTTGAA ATCTGGTCAT
TATCCTAAAA ATGGAAATCA GATAGCAATA AATGAAAAAC TAACTGCAGA AGGTCTTTAT
TTAGACGATA AAGTTAAAGT CAAAGGTGAC GATACAACTT ATAAAGTTGT AGGTATATTA
AAAAACACGA TGTATTCTCA TAGTAACATT GTTATGATGG ACCAATCCAA AATAGAACAA
AGTAGTAATG TCGCAACATT TTATGTTACG AACCAATTAT CTAAATCGGA TAAAAATAAA
ATAAATCACA TCAAAGGCGT TCAAACAGCA ACTACAGACA ATATAACAAG TAATATCGCA
AGTTATAAAG CAGAGCAAAC ACCATTGGAT ATGATGATTA TTAGTTTATA TATTATAACT
GCAATTGTAT TGAGTGCATT CTTTTATGTA ATGACGATAC AAAAGACATC TGAAATCGGT
ATTTTAAAAG CAATTGGTAT AACTACAAAG CACTTATTGA CATCATTGAT TTTACAAATT
TCAATGATTA CATTTATAGG TGTAGCTATA GCAGAAGTAG TTATTTTGCT CATCAGTCAA
ATTTTACCTG TATCTATGCC ATTCCATATA GATATGCATA ATATAATCAT TGTACTTGTC
ATATTTATGA TAGTTGGATT AATCGGTACA TCATTATCAT TTATTAAGTT AATTAAAATT
GATCCTATTG AAGCTATTGG AGGTGGCCAA TAA
|
|---|
| Protein sequence | MNLAWKEIKF YKFRFILIMF IIFLMAIMVL FISGLAQGLA RENISIFDQI KGNQFVVQKM
KEPQLEKSIL SRSKQDNISK IIDEKPFKMA GKTFKINGNE ENVMAINSVK NHQPNLKSGH
YPKNGNQIAI NEKLTAEGLY LDDKVKVKGD DTTYKVVGIL KNTMYSHSNI VMMDQSKIEQ
SSNVATFYVT NQLSKSDKNK INHIKGVQTA TTDNITSNIA SYKAEQTPLD MMIISLYIIT
AIVLSAFFYV MTIQKTSEIG ILKAIGITTK HLLTSLILQI SMITFIGVAI AEVVILLISQ
ILPVSMPFHI DMHNIIIVLV IFMIVGLIGT SLSFIKLIKI DPIEAIGGGQ
|
|---|
| |