Gene SERP1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1945 
Symbol 
ID3241282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1960345 
End bp1960992 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content35% 
IMG OID637168633 
Productdrug transporter, putative 
Protein accessionYP_189503 
Protein GI57865372 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TGATATTAAT CAATGTGATT ACTATCATTG TCCTAGTTGT TATTGGTGTG 
TTAGGCTTTT GGTTCTGGCA TAACACAACA AGTTATGTGA CAACTGACAA TGCAAAAGTT 
GATGGAGATC AAATAAAAAT CTCAAGTCCT GCATCTGGAC AAATTAAATC TCTTAATGTT 
AAGCAAGGAG ACAAACTTGA TAAAGGTGAT AAAGTAGCAG AAGTTTTAGC ACAAGGCCAA 
GATGGGCAAT CAAAAGATAT GAACATCAAA ATGCCACAAA AAGGTACTAT TGTTAAAACA 
GATGGTATCG AAGGTTCTAT GACTCAAGCA GGGAACCCAA TTGCATATGC ATATAATTTA 
GATGATCTAT ATATAACTGC TAATGTAGAT GAAAAAGATA TTTCTGACGT GGAAAAAGGC 
AACGACGTTG ATGTAGATAT CGACGGTCAA AAAGCATCAA TCAAAGGTAA GGTTGAAGAA 
GTAGGCCAAG CGACTGCAGC TAGCTTTTCA TTGATGCCAT CATCAAATAG CGACGGTAAC 
TATACGAAAG TTTCTCAGGT AGTACCCGTA AAAATCTCTT TAGATTCTAA TCCATCTAAA 
AATGTTGTCC CAGGTATGAA CGCTGAAGTT AAAATTCATA AAAATTAA
 
Protein sequence
MKKMILINVI TIIVLVVIGV LGFWFWHNTT SYVTTDNAKV DGDQIKISSP ASGQIKSLNV 
KQGDKLDKGD KVAEVLAQGQ DGQSKDMNIK MPQKGTIVKT DGIEGSMTQA GNPIAYAYNL 
DDLYITANVD EKDISDVEKG NDVDVDIDGQ KASIKGKVEE VGQATAASFS LMPSSNSDGN 
YTKVSQVVPV KISLDSNPSK NVVPGMNAEV KIHKN