Gene SERP1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1918 
Symbol 
ID3241877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1938084 
End bp1939202 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content35% 
IMG OID637168608 
Productamidohydrolase family protein 
Protein accessionYP_189478 
Protein GI57867806 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATT ATTCTACTTA TGTAGATTGG AGAAGAACGT TTCATCAATA TCCTGAACTT 
TCAGATGAAG AATATGAAAC TACAGAAAAG TTACGAAAAA TACTCAAAAG TTATGGTATA 
CGTATACTGG AGGTACCTTT AAAAACAGGT TTAGTAGCAG AAATTGGGCA AGGAGAGGAA 
ATGATAGCAG TAAGAACAGA TATTGATGCT TTGCCTATAG AAGAACAAGT GAAGCATGAA 
TTTACATCAA AGTATCAAGG TGCAATGCAT GCATGTGGTC ATGATATTCA TATGGCAAGT 
ATATTAGCTA CTGGTATTCA ACTAAAAGAG ATTGAAGATG AATTAAATGG ACGCGTTCGA 
TTAATATTTC AACCTGCTGA AGAATTAGGA CATGGTGCAT TTGAAATCAT AAATACTGGA 
GTACTTAAAG GAGCTAAAGC AGTACTTGGT TTTCATAATT ATCCCACTTT AAAAGTTGGT 
GAATTTGCTA TTAAATCGGG TGCAATTACC TCTGCTGTCG ATCGTTTTGA GTTTAATGTT 
AAAGGTAAAG GTGCGCATGC TGCAAAACCT GAGCAAGGAA ATGATCCAGT CATCGTCGTA 
GGACAACTTA TCAATAGTTT ACAAACTATT GTGAGTCGAA ATTTATCAGC TTTTGATAGT 
GCAGTTGTAA CAATCGGTGA AATTTCTTGT GGTAACACAT GGAATGTTAT AGCTGACAAA 
GCTTATATAC AGGGCACTGT TCGTTCATTC GATGAGGATA TACGTCATTA TATTGAAAAT 
AGGATGAAAA ATATTGCTGA TGGTTTAAGT CGTGTTTTTA ATGTGGATAT TGATTTAACT 
TATTCAAGAC TACCTGGTGC AGTAGTAAAT GATGCACATC TAACACAAGA AGCAATCGAG 
GTCGCTAAAA ATGTTGGCTA TCATGTATCA ATGCTCGATG AACCGGTTAC TATTGGAGAG 
GATTTTTCAG GTTATACAGA AGAATACCCC GGTGTTTTCG CATTTATTGG CTCCGACAGT 
AAATATGATT TACATCATCC TAAATATCAT CCAGATGAGC GTATTTTGGA AAAAGTTCCT 
CAATATTTCG TTCAGCTCGT TCAACGTTTA TTGACATAA
 
Protein sequence
MTNYSTYVDW RRTFHQYPEL SDEEYETTEK LRKILKSYGI RILEVPLKTG LVAEIGQGEE 
MIAVRTDIDA LPIEEQVKHE FTSKYQGAMH ACGHDIHMAS ILATGIQLKE IEDELNGRVR 
LIFQPAEELG HGAFEIINTG VLKGAKAVLG FHNYPTLKVG EFAIKSGAIT SAVDRFEFNV 
KGKGAHAAKP EQGNDPVIVV GQLINSLQTI VSRNLSAFDS AVVTIGEISC GNTWNVIADK 
AYIQGTVRSF DEDIRHYIEN RMKNIADGLS RVFNVDIDLT YSRLPGAVVN DAHLTQEAIE 
VAKNVGYHVS MLDEPVTIGE DFSGYTEEYP GVFAFIGSDS KYDLHHPKYH PDERILEKVP 
QYFVQLVQRL LT