Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1901 |
Symbol | |
ID | 3241999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1922994 |
End bp | 1923866 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168592 |
Product | RpiR family phosphosugar-binding transcriptional regulator |
Protein accession | YP_189462 |
Protein GI | 57867776 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCAAACA TTTTGTATAA GATTGACAAC CAGTATCCCT ATTTCACTAA AAACGAGAAA AAAATTGCGC AATTTATTCT CAACTATCCT CATAAAGTTG TTAATATGAC TTCTCAAGAA ATTGCAAATC AATTAGAAAC TAGTTCTACT TCTATCATAC GTCTAAGTAA AAAGGTAACA CCCGGTGGCT TTAATGAACT TAAAACACGT TTGTCTAAAT TTTTACCTAA AGAAGTCACA CAATATAATG TTGAGTTAGT TGATAACGAA AGTACAATTT CACTTAAAAA CAAATTGCAT TCTCGCTCTA AGGCAGCGTT AAGTAATGCT AATGAAACCA TTAACGCTGC TATCATCGAT GAAATTTGTG ATCTAATTAA AAATTCTGAA ACCATATTTA TTTACGGCTA TGGTGCCTCA TTTGTTGTAG CAACAGATTT ATATCAAAAA TTATCTCGCA TCGGTCTAAA TATTCAACTA GTGCATGAAA CTCATATTTT CACCACTATG TTAGCAACAC GTAACTCTAA TGATTGTGTT ATATTTATAT CTAACAATGG TACTCAAAGT GAAATGCAAT CTATTGCTAA AGTCATTGCA GACTATCACA TTCCCATTGC GACTATTTCA AGCACTTCTG ATAATCCAGT TGCAAAGCAA TCTAATATTG TTTTAACCTA TGGACAAACC GATGAAAATG AGATGCGTAT GGGAGCCACA ACTTCGTTAT TTGCACAAAT GTTTACTATT GATATATTGT ACTATCGATA TATTGCGCTA AATTATCAAT CATCTTTAGA TTTTATTACT CAATCAAAAA TTGCATTAGA TAATTACCGT AAACATCTCT CGAATATAGA TTTTAAACAT TAA
|
Protein sequence | MPNILYKIDN QYPYFTKNEK KIAQFILNYP HKVVNMTSQE IANQLETSST SIIRLSKKVT PGGFNELKTR LSKFLPKEVT QYNVELVDNE STISLKNKLH SRSKAALSNA NETINAAIID EICDLIKNSE TIFIYGYGAS FVVATDLYQK LSRIGLNIQL VHETHIFTTM LATRNSNDCV IFISNNGTQS EMQSIAKVIA DYHIPIATIS STSDNPVAKQ SNIVLTYGQT DENEMRMGAT TSLFAQMFTI DILYYRYIAL NYQSSLDFIT QSKIALDNYR KHLSNIDFKH
|
| |