Gene SERP1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1875 
SymbolureD 
ID3241880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1899070 
End bp1899906 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content32% 
IMG OID637168566 
Producturease accessory protein UreD 
Protein accessionYP_189436 
Protein GI57867809 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.37143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGC AACATTGGAC CGGTCAATTA GATTTAACAG TTTTCAATAA TGGTGAAAGT 
TCGAAAGCAC GAAATATATT TTTTGAAAAG GCGCTCAAAG TATTACGACC TATATATTTA
GAACAATCTC CTGTGCCAAC TTTCTATATT GTCAATGTGG GTGGAGGTTA TCTAGATGGA
GATAGATACC GTGTCAATGT CAACTTAGAA GATAATGCAC AAGTGACGCT TACTTCTCAA
GGTGCAACTA AAATATATAA AACGCCTAAT GACCATGTAG AACAGTATCA AACGTTTAAT
TTATCAAATC AATCGTATAT GGAATTTGTA GCAGATCCTA TTATTGCCTA TGAAAACGCT
AAATTTTTCC AACATAATAC GTTTAATCTT AAAGAAGATA GTGCTATATT TTACACAGAT
ATATTGACTC CCGGCTATTC ATCTAATGGC CAAGATTTCA CGTATAATTA TATGCATCTT
ACTAATGAAA TTTACATTGA CAATCAATTA GTTGTTTTCG ATAACATGAT GTTAAGTCCT
GATAAAAGCC GACTTGACGG TATTGGGTAT ATGGAAAATT ATACACACTT AGGATCAGCT
TATTTTATTC ATCCAGATGT AAACCAAAGT TTCATAGACG ATATTTACGT GGCGGTTGCT
GATTTTCAAA AACAATACGA CTGTAGAATA GGTATCTCAC AATTACCTAC TCATGGATTG
GCCGTTCGTA TTTTGACTAA AAGAACTCAA ATAATAGAAG AAATTTTGAC TCGTGTTCAA
TCATATATCA ATCAAACGAT TTATCATCGA CAAATTAACT TCTTAAGAAA ATATTAA
 
Protein sequence
MAEQHWTGQL DLTVFNNGES SKARNIFFEK ALKVLRPIYL EQSPVPTFYI VNVGGGYLDG 
DRYRVNVNLE DNAQVTLTSQ GATKIYKTPN DHVEQYQTFN LSNQSYMEFV ADPIIAYENA
KFFQHNTFNL KEDSAIFYTD ILTPGYSSNG QDFTYNYMHL TNEIYIDNQL VVFDNMMLSP
DKSRLDGIGY MENYTHLGSA YFIHPDVNQS FIDDIYVAVA DFQKQYDCRI GISQLPTHGL
AVRILTKRTQ IIEEILTRVQ SYINQTIYHR QINFLRKY