Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1875 |
Symbol | ureD |
ID | 3241880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1899070 |
End bp | 1899906 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168566 |
Product | urease accessory protein UreD |
Protein accession | YP_189436 |
Protein GI | 57867809 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0829] Urease accessory protein UreH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.37143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGC AACATTGGAC CGGTCAATTA GATTTAACAG TTTTCAATAA TGGTGAAAGT TCGAAAGCAC GAAATATATT TTTTGAAAAG GCGCTCAAAG TATTACGACC TATATATTTA GAACAATCTC CTGTGCCAAC TTTCTATATT GTCAATGTGG GTGGAGGTTA TCTAGATGGA GATAGATACC GTGTCAATGT CAACTTAGAA GATAATGCAC AAGTGACGCT TACTTCTCAA GGTGCAACTA AAATATATAA AACGCCTAAT GACCATGTAG AACAGTATCA AACGTTTAAT TTATCAAATC AATCGTATAT GGAATTTGTA GCAGATCCTA TTATTGCCTA TGAAAACGCT AAATTTTTCC AACATAATAC GTTTAATCTT AAAGAAGATA GTGCTATATT TTACACAGAT ATATTGACTC CCGGCTATTC ATCTAATGGC CAAGATTTCA CGTATAATTA TATGCATCTT ACTAATGAAA TTTACATTGA CAATCAATTA GTTGTTTTCG ATAACATGAT GTTAAGTCCT GATAAAAGCC GACTTGACGG TATTGGGTAT ATGGAAAATT ATACACACTT AGGATCAGCT TATTTTATTC ATCCAGATGT AAACCAAAGT TTCATAGACG ATATTTACGT GGCGGTTGCT GATTTTCAAA AACAATACGA CTGTAGAATA GGTATCTCAC AATTACCTAC TCATGGATTG GCCGTTCGTA TTTTGACTAA AAGAACTCAA ATAATAGAAG AAATTTTGAC TCGTGTTCAA TCATATATCA ATCAAACGAT TTATCATCGA CAAATTAACT TCTTAAGAAA ATATTAA
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Protein sequence | MAEQHWTGQL DLTVFNNGES SKARNIFFEK ALKVLRPIYL EQSPVPTFYI VNVGGGYLDG DRYRVNVNLE DNAQVTLTSQ GATKIYKTPN DHVEQYQTFN LSNQSYMEFV ADPIIAYENA KFFQHNTFNL KEDSAIFYTD ILTPGYSSNG QDFTYNYMHL TNEIYIDNQL VVFDNMMLSP DKSRLDGIGY MENYTHLGSA YFIHPDVNQS FIDDIYVAVA DFQKQYDCRI GISQLPTHGL AVRILTKRTQ IIEEILTRVQ SYINQTIYHR QINFLRKY
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