Gene SERP1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1847 
Symbol 
ID3241976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1877107 
End bp1878300 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content33% 
IMG OID637168540 
Productdrug transporter, putative 
Protein accessionYP_189410 
Protein GI57867754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.350874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGT CTACAATAAT TAAAGACCCC ATCTTTACGA AGAGTTTTAA TATTAACTTT 
GCTATTAACT TTTTTGTTTA TCTATGTATG TATTTATTAA TTGTCGTTAT CGCGAGCTAT
AGTAAATCAG AATACCATGC TTCTGATTCT GTTGCTGGAC TCGTAGTCGG ACTTTTTATA
GTAGGATCAT TAATAGGTCG ATTTGTAACA GGTAAATACG TCAATCGATT TGGTCCAAAA
AAAATTCTCA TTTTTGGTTT AATATGTTTA GTAGTAACAC AGCTACTTTA TTTTATACCT
GGTTCTGTTT GGTTCTTAAT GATGGTGCGT TTAATGAACG GCTTAGCAAC AGCGGTTGCT
ACAACTGCTA CAGGAACAAT AGCAGCATAT ATTACACCAC CTACACGCAA AAGTGAAGGT
ATCAGTTTAT TCTCATTAAG TTTGGTGTTG GGAACCGCTA TTGGCCCATT TTTTGGTATG
TTATTGATGA ATTCCTTTTC TATCAATATT TTATTTACTA TTTGTGTAAT TTTAGGTGTC
ATAAGTGGTC TATTATCACT GTTAATTAAA ATTAATTTCA CAACAGTTAA AGAAAACACA
ATTACACATA AACGATTCAA TTTGGCTCAT TTTGTAGCCA AAGAAGCCAT TCCGGTAGCA
TTCGTCATGC TATTAATCGG TGTTACTTAC GCTGCAATTT TAACTTATTT ACAGGCTTTT
GCTGTTGAAA GAGATCTAGT TACATCAGCA AGTTACTTTT TCATTTTTTA TGCTATTGCG
TCCCTCATAA CAAGACCTAT TGCTGGAAGA TTGATGGATG ATAAAAACGA AAATGTAGTT
GTTTATCCAG CATTTATCTT TTTAGTATTA TCTTTTGTTC TACTGATGCT TAGTTTTAAC
GGATGGGTAT TACTTATTGC AGGTATCGCA TTAGGAATTG GTTATGGTAA CTTGTCATCT
TGTATGCAAG CTATCGCAAT AAAAGTATCT CCATCAAATA AATATGGCTT AGCTACATCA
ACTTACTTTA TTGGTTTAGA TATAGGAATT GGATTTGGAC CATCCTTACT AGGTCTTTTC
ACACATATGA TTTCTTATAG TCAATTATAT GGAATCATGG GTATTTTAGG ATTTACAACT
TTAGTCATCT ATATTTTAGT GCACGGACGT AAGGTTTACA GCACTTCATA TTAA
 
Protein sequence
MNQSTIIKDP IFTKSFNINF AINFFVYLCM YLLIVVIASY SKSEYHASDS VAGLVVGLFI 
VGSLIGRFVT GKYVNRFGPK KILIFGLICL VVTQLLYFIP GSVWFLMMVR LMNGLATAVA
TTATGTIAAY ITPPTRKSEG ISLFSLSLVL GTAIGPFFGM LLMNSFSINI LFTICVILGV
ISGLLSLLIK INFTTVKENT ITHKRFNLAH FVAKEAIPVA FVMLLIGVTY AAILTYLQAF
AVERDLVTSA SYFFIFYAIA SLITRPIAGR LMDDKNENVV VYPAFIFLVL SFVLLMLSFN
GWVLLIAGIA LGIGYGNLSS CMQAIAIKVS PSNKYGLATS TYFIGLDIGI GFGPSLLGLF
THMISYSQLY GIMGILGFTT LVIYILVHGR KVYSTSY