Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1847 |
Symbol | |
ID | 3241976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1877107 |
End bp | 1878300 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168540 |
Product | drug transporter, putative |
Protein accession | YP_189410 |
Protein GI | 57867754 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.350874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCAGT CTACAATAAT TAAAGACCCC ATCTTTACGA AGAGTTTTAA TATTAACTTT GCTATTAACT TTTTTGTTTA TCTATGTATG TATTTATTAA TTGTCGTTAT CGCGAGCTAT AGTAAATCAG AATACCATGC TTCTGATTCT GTTGCTGGAC TCGTAGTCGG ACTTTTTATA GTAGGATCAT TAATAGGTCG ATTTGTAACA GGTAAATACG TCAATCGATT TGGTCCAAAA AAAATTCTCA TTTTTGGTTT AATATGTTTA GTAGTAACAC AGCTACTTTA TTTTATACCT GGTTCTGTTT GGTTCTTAAT GATGGTGCGT TTAATGAACG GCTTAGCAAC AGCGGTTGCT ACAACTGCTA CAGGAACAAT AGCAGCATAT ATTACACCAC CTACACGCAA AAGTGAAGGT ATCAGTTTAT TCTCATTAAG TTTGGTGTTG GGAACCGCTA TTGGCCCATT TTTTGGTATG TTATTGATGA ATTCCTTTTC TATCAATATT TTATTTACTA TTTGTGTAAT TTTAGGTGTC ATAAGTGGTC TATTATCACT GTTAATTAAA ATTAATTTCA CAACAGTTAA AGAAAACACA ATTACACATA AACGATTCAA TTTGGCTCAT TTTGTAGCCA AAGAAGCCAT TCCGGTAGCA TTCGTCATGC TATTAATCGG TGTTACTTAC GCTGCAATTT TAACTTATTT ACAGGCTTTT GCTGTTGAAA GAGATCTAGT TACATCAGCA AGTTACTTTT TCATTTTTTA TGCTATTGCG TCCCTCATAA CAAGACCTAT TGCTGGAAGA TTGATGGATG ATAAAAACGA AAATGTAGTT GTTTATCCAG CATTTATCTT TTTAGTATTA TCTTTTGTTC TACTGATGCT TAGTTTTAAC GGATGGGTAT TACTTATTGC AGGTATCGCA TTAGGAATTG GTTATGGTAA CTTGTCATCT TGTATGCAAG CTATCGCAAT AAAAGTATCT CCATCAAATA AATATGGCTT AGCTACATCA ACTTACTTTA TTGGTTTAGA TATAGGAATT GGATTTGGAC CATCCTTACT AGGTCTTTTC ACACATATGA TTTCTTATAG TCAATTATAT GGAATCATGG GTATTTTAGG ATTTACAACT TTAGTCATCT ATATTTTAGT GCACGGACGT AAGGTTTACA GCACTTCATA TTAA
|
Protein sequence | MNQSTIIKDP IFTKSFNINF AINFFVYLCM YLLIVVIASY SKSEYHASDS VAGLVVGLFI VGSLIGRFVT GKYVNRFGPK KILIFGLICL VVTQLLYFIP GSVWFLMMVR LMNGLATAVA TTATGTIAAY ITPPTRKSEG ISLFSLSLVL GTAIGPFFGM LLMNSFSINI LFTICVILGV ISGLLSLLIK INFTTVKENT ITHKRFNLAH FVAKEAIPVA FVMLLIGVTY AAILTYLQAF AVERDLVTSA SYFFIFYAIA SLITRPIAGR LMDDKNENVV VYPAFIFLVL SFVLLMLSFN GWVLLIAGIA LGIGYGNLSS CMQAIAIKVS PSNKYGLATS TYFIGLDIGI GFGPSLLGLF THMISYSQLY GIMGILGFTT LVIYILVHGR KVYSTSY
|
| |