| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1843 |
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| Symbol | |
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| ID | 3241964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1870861 |
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| End bp | 1874016 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637168536 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_189406 |
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| Protein GI | 57867742 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0542827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA AATTATTACA ATTTTCGTTA GGTAATAAAT TCGCTATTTT TTTGATGGTA
GTTTTAATTA TATTAGGTGG CGTTTATTCA AGCGCCAAAT TAAAACTTGA ATTATTACCA
GATGTTGAAA ATCCAGTTAT TTCAGTTCAA ACTACAATGT CTGGAGCAAC ACCCCAGTCA
ACACAAGATG AAATAAGTAG CAAGATTGAT AATCAAGTAC GCTCGTTGGC CTACGTAAAT
AGTGTACAGA CTGAATCTAT ACCTAATGCT TCTATAGTAA CTGTAGAATA CGATAATGGT
ACAGATATGG ATAAAGCTGA AGAACAATTA AAAAAAGAAA TCGACAAAAT TAAGTTTAAA
GATGGCGTTG GTGAACCCGA ATTAACAAGG AACTCTATGG ATGCTTTTCC AATTGTGGCA
TATTCTTTTA CGAGTAATAA TCAAAAGTTA AAAGACGTTA CTAAAAAGTT AAATCAACAG
CTCGTACCAA AATTACAAAC CATTGATGGT GTACAAAATG CACAATTAAA CGGTCAAACT
AATCGTGAAG TATCGTTAAA GTTTAAACAA AAAAATTTAG ATGAAAAAGG TTTAACTGCA
AATGATGTTG AGAACTATAT AAAAACGGCT ACACGTGAAA CGCCATTAGG ACTTTTCCAA
TTTAATAAGA GTAATAAATC TATTGTTGTT GATGGTCAAT TTAAATCTGT AGACGCTTTT
AAAAATCTTA AAATCCCTTT ATCTATTTCT GGACAAGCTG CACAAAATGA TAGCGATTCC
GACAGTGATA GTCTAATGCC AAGTGATAAT ACTCGCTCGA CTAATAGTTC AACTCATATG
GCACAGAAAG GCCAAATGCC ATCTGTACCA CTTAAAGATT TAGCAGATAT TAGTGTCGGT
GATGAACGTA CTTCTATATC CAAGACAAAT GGAAAAGATG CTGTTAACTT ACAAATTATG
AAATCACAAG ATGCTAATAC TGTGCAAGTT GCGAGAGAAG TTCAGAAAAA AGTAGATGAA
TTTGTACGTA ATGAGAGTGG AATGAAATCT ATTAAAACAA TGGATACTGC TAAACCTATT
GAAGACTCTC TTTATACTAT GGTTGAAAAG GCCGCTCTCG GTACGATTGT TGCTATTATC
GTTATTCTTC TGTTTTTAAG AAATATAAGA ACTACAGCTA TTTCAATTGT ATCTATACCA
ATGTCAATAT TAATTGCGCT CATAGCATTA AAATTAAGCA ACGTATCATT AAATATTCTT
ACTTTAGGTG CATTAACGGT TGCAATCGGG CGAGTTATAG ATGATTCTAT AGTTGTCGTT
GAGAATATAT TTAGAAGATT ATCTGATCCG AATGAGAAGC TCAAAGGTGA AAATTTAATT
ATAAGCGCTA CTAGAGAAGT ATTTAAACCT ATTATGTCAT CGACCCTTGT TACTATAGTA
GTGTTTTTAC CACTAGTGTT TGTGTCAGGT TCAGTAGGTG AAATGTTTAG ACCATTTGCG
CTAGCCATTA CTTTTAGTTT ATTAGCTTCA CTACTTGTTT CGATTACCCT AGTGCCTTCT
TTAGGTGCAA CATTTTTTAA AAATGGCGTT AAAAATAGGG AACAAAAAGA AGGTCTAGGA
ACAGTTGGGA GAGCCTATAG AAGCGCTTTG AATTGGTCAC TTAATCATAA ATGGATTGTG
CTTATAGTTA GTATTTTTAT TTTAGTTGGA AGTGTGGTCA TAGGCGCAAG AAATCTAGGA
ACGAGTTATA TTTCAACTGG AGATAATAAA TTTTTAGCTC TAACATATAC TCCAAAACCT
GGAGAAACAC AGAAATCTGT GACACAACAT GCTGAAAAAG TACAAAATTA TTTAGATAAA
AAAGATAAAG TAGAAACTGT TCAATATTCT ATAGGTGGTC CTACACCACA AGATCCTACC
GGTAGTACCA ACAGCATGGC AATTATGATT AAATATCAAT CTGACACGCC TAATTTTGAT
GAAGAGCCTG ATAAAGTACT TAAACATATC GAGACATTTA AACAACCTGG AGAATGGAAA
AATCAAGATT TAGGAACAGG AGCAGGTAAT AATTCTGTCG AAGTAACTGT CAAAGGACCT
AATACAAGTG CAATGAAAGA TACAGTCAAC CGTGTAGAGA AAATGATGAC TGATATTAAA
GGCATAACGA ATGTTAAATC TGATTTATCA CAGACGTATG ACCAATATGA AATAAAAGTT
GACCAAAATA AAGCTGCAGA TAATGGTATT TCTGCTGCAC AACTTGCGAT GAATCTTAAT
GAAAACTTAC CTGAGAAAAC AATTTCTACA GTTAATGAAA AGGGTAAATC TATAGATGTA
AAGGTCAAAC AAAATAAGCA AACAGATTGG TCTTCTCAAA AAATTAAAAA CATTAAACTA
AATAAGCCTA CGGGCGGTAC GATTAAACTT AGTGAAATAG CATCTCTTAA AAAATCATAT
ACACCAAGTA AACTGACTCA AGAAGATGGC GATTATGCTA CGACTGTTAC AGGTAAAGTG
ACTGATAAAG ATGTGGGTGG TAAATCTCAA CAAGTTATGG CTAAAGTGAA AGACCTTGAG
AAACCTAGTC ATATTAAAAT TAATGTCGGC GGTGCAACTG ATGACATTGA TAAGGCTATT
TCTCAGCTTG CTATGGCGAT GATAGCAGCA ATTATCATTG TTTATTTAAT TTTAGTTATT
ACATTTAGAG GTGGTCTGGC ACCATTTACA ATCTTGTTCT CATTACCATT TACGGTTATC
GGTGTAGTAC TTGCACTCAT CATTACCGGA GAAACTATTT CAGTTCCAAG TTTAATAGGT
ATGCTTATGT TAATTGGTAT CGTTGTTACG AATGCTATAG TATTAATCGA TCGTGTTATT
AACAATGAAA AACAAGGTAT GCCGATGAAA CAGGCATTGA TAGAAGCGGG TGGTACACGG
ATAAGACCTA TATTAATGAC AGCAATTGCA ACAATAGGTG CACTAGTGCC GTTGTTATTT
GGTCATGACA GTTCAATATT AATTTCAAAA GGTATGGCTG CAACAGTAAT AGGTGGATTA
ATTTCTTCAA CGCTACTCAC ACTCTTTGTA GTACCGGTTA TATACGAAAT TTTATTCACT
TTAAAAAATA AAATTACTAA AAAGTTTAAT ATGTAA
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| Protein sequence | MIKKLLQFSL GNKFAIFLMV VLIILGGVYS SAKLKLELLP DVENPVISVQ TTMSGATPQS
TQDEISSKID NQVRSLAYVN SVQTESIPNA SIVTVEYDNG TDMDKAEEQL KKEIDKIKFK
DGVGEPELTR NSMDAFPIVA YSFTSNNQKL KDVTKKLNQQ LVPKLQTIDG VQNAQLNGQT
NREVSLKFKQ KNLDEKGLTA NDVENYIKTA TRETPLGLFQ FNKSNKSIVV DGQFKSVDAF
KNLKIPLSIS GQAAQNDSDS DSDSLMPSDN TRSTNSSTHM AQKGQMPSVP LKDLADISVG
DERTSISKTN GKDAVNLQIM KSQDANTVQV AREVQKKVDE FVRNESGMKS IKTMDTAKPI
EDSLYTMVEK AALGTIVAII VILLFLRNIR TTAISIVSIP MSILIALIAL KLSNVSLNIL
TLGALTVAIG RVIDDSIVVV ENIFRRLSDP NEKLKGENLI ISATREVFKP IMSSTLVTIV
VFLPLVFVSG SVGEMFRPFA LAITFSLLAS LLVSITLVPS LGATFFKNGV KNREQKEGLG
TVGRAYRSAL NWSLNHKWIV LIVSIFILVG SVVIGARNLG TSYISTGDNK FLALTYTPKP
GETQKSVTQH AEKVQNYLDK KDKVETVQYS IGGPTPQDPT GSTNSMAIMI KYQSDTPNFD
EEPDKVLKHI ETFKQPGEWK NQDLGTGAGN NSVEVTVKGP NTSAMKDTVN RVEKMMTDIK
GITNVKSDLS QTYDQYEIKV DQNKAADNGI SAAQLAMNLN ENLPEKTIST VNEKGKSIDV
KVKQNKQTDW SSQKIKNIKL NKPTGGTIKL SEIASLKKSY TPSKLTQEDG DYATTVTGKV
TDKDVGGKSQ QVMAKVKDLE KPSHIKINVG GATDDIDKAI SQLAMAMIAA IIIVYLILVI
TFRGGLAPFT ILFSLPFTVI GVVLALIITG ETISVPSLIG MLMLIGIVVT NAIVLIDRVI
NNEKQGMPMK QALIEAGGTR IRPILMTAIA TIGALVPLLF GHDSSILISK GMAATVIGGL
ISSTLLTLFV VPVIYEILFT LKNKITKKFN M
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