| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1836 |
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| Symbol | topB |
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| ID | 3241273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1864678 |
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| End bp | 1866813 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637168529 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_189399 |
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| Protein GI | 57867728 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000886336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTT TAATCTTAGC TGAAAAACCA TCTGTCGGAA GAGATATCGC TAATGCTTTG
AATCTTCAAC AAAAAAGTAA TGGTTATATA GAAGGGAAAC AGTATATAGT AACTTGGGCA
TTGGGGCATC TTGTGACAAA TGCAACGCCT GAACAATATA ACCCTTCATA TAAAGAATGG
AATTTAGAAG ACTTACCTAT CATTCCTAAG AAAATGAAAA CAGTAGTGAT TAGTAAAACA
AATAGACAAT TTAAAATTGT AAAATCTTTA ATTTTAGATA AAAATGTTAA AGAAATTATT
ATAGCAACAG ATGCTGGACG AGAAGGTGAA CTAGTAGCTC GTCTTATTTT AGATAAAGTA
GGTAATAAAA AACCAATCAA GCGTTTGTGG ATTAGTTCGG TTACAAAAAA AGCCATACAA
GAAGGATTTA AACAGTTAAA AAATGGAAAC GCGTATCAAA ATTTATATGA AGCAGCACTT
GCACGAAGTG AAGCAGATTG GATAGTAGGG ATTAATGCAA CACGTGCACT AACGACAAAA
TATGATGCAC AATTATCATT AGGTCGTGTA CAAACTCCAA CAATACAAAT AGTTAAATCA
AGACAAGATG AGATTAACTA TTTTAAACCA GAAAAATATT ACACGTTATC CATTAATGTT
GATGGTTACG ATTTAAACCT TAAGCAACAA AAGCGATATA AAGATAAAAA AGAATTAGAA
TTGATTGAAC ATAAAATTAA ACATCAAGAA GGAAAGATAT TAGAAGTTAA AGGAAAAAAT
AAGAAATCTT ACGCGCAACC TTTATTTAAT TTAACAGATT TACAACAAGA GGCATATAAA
CATTACAAGA TGGGGCCAAA GGAGACACTA AATACATTAC AACATTTATA TGAGAGACAT
AAGTTAGTAA CCTATCCCCG TACAGATTCT AATTATTTAA CAGATGATAT GGTCGATACA
ATTCAAGAAC GGTTAAGAGC AATTTTAGCT ACAGATTATA AATCTCATGT TCGAGATTTA
ATTTCTGAGT CCTTTTCTTC TAAAATGCAT ATTTTTAATA ATCAAAAAGT TTCAGATCAT
CATGCGATTA TTCCCACAGA GGTTAGACCA TCTATTGAAC AATTGAGTCA ACGAGAGTTT
AAAATTTATA TGCTAATCGC AGAAAGATTT TTAGAAAATT TAATGAATCC TTATTTATAT
GAAGTTTTAA CAATCCATGC ACAACTGAAA GATTACAATT TTGTTTTAAA AGAGATAATA
CCTAAACAAT TAGGATATAA AGCTTTAAAA GATCAAACCT CTTCGCATAC TTTAACGCAT
TCTTTTAAAG AAGGTCAGTT ATTTAAAGTA CATCGTATTG AGATTCATGA ACATGAAACA
AAGGCACCGG AATATTTTAA CGAAGGTTCA TTACTTAAAG CCATGGAGAA TCCACAAAAT
CATATTGATT TGAATGATAA AAAGTATGCA AAAACACTCA AACATTCGGG GGGGATTGGA
ACTGTAGCAA CTAGGGCTGA TATTATAGAA AAGTTATTTA ACATGAATGC TTTAGAGTCG
CGAGATGGCA AAATTAAAGT TACATCAAAA GGAAAACAAA TTTTAGAATT GTCTCCAAGT
GAATTAACCT CACCTATACT AACAGCCCAA TGGGAAGAAA AATTAATGCT TATCGAAAAG
GGGAAATATA ATTCTCAGAA ATTCATACAG GAAATGAAAA ACTTTACATT TAAAGTAGTA
AATAAAATTA AAAGCAGTGA GCAAAAATAT AAACATGATA ATTTAACAAC AACCGAGTGC
CCAACATGTG GTAAGTTTAT GATAAAAGTC AAAACTAAAA ATGGACAGAT GCTTGTATGT
CAAGATCCCA AATGTAAAAC TAAGAAAAAT ATTCAACGCA AGACTAATGC ACGTTGCCCT
TATTGTAAGA AAAAAATGAC TTTATTCGGT AAAGGGAAAG AAGCTGTTTA TAGATGTGTA
TGTGGCCACA CAGAAACTCA ATCACAAATG GACAAAAGAA TGAGAGATAA AACGAATGGT
AAAGTTTCAC GTAAAGAAAT GAAAAAATAT ATAAATAAAA AAGAAGAAAT CGACAATAAT
CCATTCAAAG ATGCTCTGAA AAATCTCAAA TTGTAG
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| Protein sequence | MKSLILAEKP SVGRDIANAL NLQQKSNGYI EGKQYIVTWA LGHLVTNATP EQYNPSYKEW
NLEDLPIIPK KMKTVVISKT NRQFKIVKSL ILDKNVKEII IATDAGREGE LVARLILDKV
GNKKPIKRLW ISSVTKKAIQ EGFKQLKNGN AYQNLYEAAL ARSEADWIVG INATRALTTK
YDAQLSLGRV QTPTIQIVKS RQDEINYFKP EKYYTLSINV DGYDLNLKQQ KRYKDKKELE
LIEHKIKHQE GKILEVKGKN KKSYAQPLFN LTDLQQEAYK HYKMGPKETL NTLQHLYERH
KLVTYPRTDS NYLTDDMVDT IQERLRAILA TDYKSHVRDL ISESFSSKMH IFNNQKVSDH
HAIIPTEVRP SIEQLSQREF KIYMLIAERF LENLMNPYLY EVLTIHAQLK DYNFVLKEII
PKQLGYKALK DQTSSHTLTH SFKEGQLFKV HRIEIHEHET KAPEYFNEGS LLKAMENPQN
HIDLNDKKYA KTLKHSGGIG TVATRADIIE KLFNMNALES RDGKIKVTSK GKQILELSPS
ELTSPILTAQ WEEKLMLIEK GKYNSQKFIQ EMKNFTFKVV NKIKSSEQKY KHDNLTTTEC
PTCGKFMIKV KTKNGQMLVC QDPKCKTKKN IQRKTNARCP YCKKKMTLFG KGKEAVYRCV
CGHTETQSQM DKRMRDKTNG KVSRKEMKKY INKKEEIDNN PFKDALKNLK L
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