Gene SERP1794 details

Gene Information

• Locus tag: SERP1794
• Symbol: lacB
• ID: 3241278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1840409
• End bp: 1840924
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637168487
• Product: galactose-6-phosphate isomerase subunit LacB
• Protein accession: YP_189357
• Protein GI: 57867733
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01119] galactose-6-phosphate isomerase, LacB subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.623849
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTG CAATAGGTTG CGATCATATT GTTACTGATA CAAAAATGGA AGTTTCACAA 
CACTTAAAAT CACAGGGACA TGAAGTGATA GATGTTGGAA CTTATGATTT CACACGTACA 
CATTATCCGA TTTATGGAAA AAAGGTAGGA GAAAAAGTTG CGAGTGGTGA AGCAGATTTA 
GGTGTATGTA TTTGTGGTAC TGGTGTAGGA ATTAGTAATG CTGCAAACAA AGTACCAGGT 
GTTAGAACTG CTTTAGTTAG AGATATGACA TCAGCGCTTT ATTCTAAAGA AGAGTTAAAC 
GCCAATGTTG TAAGTTTTGG CGGTAAAGTA GCAGGTGAAT TATTTATTTT CGACATCGTT 
GATGCATTCA TTGAGGCAGA GTACAAACCT ACTGAAGAAA ATAAAAAATT AATTGCTAAA 
ATCAATCATT TAGAAGCACA TAACAATGAC CAAGCTGATC CACATTTCTT CGACGAGTTC 
TTAGAAAAAT GGAATAAAGG TGAATATCAC GATTAA 

 

Protein sequence

MKIAIGCDHI VTDTKMEVSQ HLKSQGHEVI DVGTYDFTRT HYPIYGKKVG EKVASGEADL 
GVCICGTGVG ISNAANKVPG VRTALVRDMT SALYSKEELN ANVVSFGGKV AGELFIFDIV 
DAFIEAEYKP TEENKKLIAK INHLEAHNND QADPHFFDEF LEKWNKGEYH D