| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1782 |
|---|
| Symbol | |
|---|
| ID | 3241248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1828323 |
|---|
| End bp | 1828823 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637168476 |
|---|
| Product | alkaline shock protein 23 |
|---|
| Protein accession | YP_189346 |
|---|
| Protein GI | 57867704 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1302] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.369118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAG ATAACAATAA AGCTAAACAA GCATATGATA ATCAAACAGG TGTTAATGAA
CAAGAAAGAA AAGAGCAACA ACAAGCTCAA AATAATCAAC CTCAATTTGA AAACAAATTA
ACTTTCTCAG ATGAAGTAGT TGAAAAAATT GCAGGTATTG CAGCACGTGA AGTTAAAGGA
ATTTTAGACA TGAAAGGTGG CTTCACAGAT AGCTTTACTA ACGCTTTCTC AAACGGTAAC
AATGTAACTA CAGGCGTATC TGTAGAAGTT GGAGAAAAAC AAGCTGCTGT AGATTTAAAA
GTTATTTTAG AATATGGTGA ATCTGCACCT AAAATTTTCC GTAAAGTGAC AGACTTAGTT
AAAGAACAAG TAAAATATAT TACTGGTTTA GAAGTTGTTG AAGTTAACAT GCAAGTTGAC
GACGTAATGA CAAAAAAAGA ATGGCAACAA AAAAATGAAA AAGATAACAA AGAAAACAAT
GAAAGAGAAG GTTTAAAATA A
|
|---|
| Protein sequence | MAVDNNKAKQ AYDNQTGVNE QERKEQQQAQ NNQPQFENKL TFSDEVVEKI AGIAAREVKG
ILDMKGGFTD SFTNAFSNGN NVTTGVSVEV GEKQAAVDLK VILEYGESAP KIFRKVTDLV
KEQVKYITGL EVVEVNMQVD DVMTKKEWQQ KNEKDNKENN EREGLK
|
|---|
| |