| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1744 |
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| Symbol | pdp |
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| ID | 3242741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1783289 |
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| End bp | 1784590 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637168429 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_189308 |
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| Protein GI | 57867628 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGA TTGACATCAT AGAAAAGAAA CGAGACGGTA AGTCATTAAC CAAAGAAGAA
ATAGAATTTT TTGTAAACGG ATACACTCAT GGGGAGGTTC CAGATTACCA AGCTTCAAGT
TTAGCTATGG CGATATTCTT TCAAGATATG AATGATGAAG AAAGAGCGGC ATTGACAATG
TCAATGGTTA ACTCAGGAGA GAAAATCGAC TTAAGCGATA TCAATGGTAT TAAGGTAGAC
AAGCATTCTA CAGGGGGCGT CGGTGATACA ACGACACTCG TTCTTGCCCC ATTAGTAGCG
GCAGTAGGTG TTCCAGTTGC AAAGATGAGT GGTCGTGGTC TAGGACATAC GGGGGGTACG
ATAGATAAAT TAGAATCAGT TAAGGGATTT AACGTTGAAA TCAGTGAAAA AGATTTTATA
AAACTTGTAA ATGATAATCA AGTAGCAGTA ATAGGACAAT CAGGCAATCT GACCCCAGCT
GATAAAAAAT TATATGCACT ACGGGATGTA ACAGGGACAG TTAATTCTAT TCCTCTAATC
GCTTCGTCCA TAATGAGTAA GAAAATTGCT GCTGGCGCAG ATGCAATTGT TCTAGATGTC
AAAACTGGCA GTGGTGCGTT TATGAAGACG CTAGATGATG CCGAAGCGCT TGCGCATGCG
ATGGTAAGAA TTGGTAATAA TGTAGGTCGT AATACGATGG CTATTATTTC AGATATGAGT
CAACCTTTAG GAAATGCAAT TGGTAATGCG CTCGAATTAA AAGAAGCTAT CGCAACATTA
AAAGGAAATG GGCCGAAAGA CCTAACAGAG CTTGTGTTAA CACTTGGTTC TCAAATGGTT
GTCTTAGCTG AACAAGCAAC ATCTTTAGAT GAAGCGCGTC AGATGCTAAT CGATGCTATA
AAAACAGGCA AAGCTTTAAA CAAATTCAAA ACATTTCTAT CGAATCAAGG AGGAGATGAC
TCTATTGTGG ATTCTCCTGA AAAGTTACCT AGCGCGAAAT ATCAAGTTGA ATTTAAAGCT
AAAAAAGATG GTTATATAAC TGAAATAATA GCTAATGAGA TAGGCGTTGC TTCAATGATG
TTAGGCGCTG GTCGTCAAAC AAAAGAAGAC GTTATTGATT TAGGTGTAGG TATCGTGTTA
AATAAAAAAG TAGGAGAACA TGTTGAGAAA GGTGAAAATA TTTTAACTAT TCATACCAAC
ACCAAAGAGA TCGATGATAT TTTATATAAA CTAGACAATA GTATTACTAT TGAGAGTAAG
GGCGAAGCTC CAACCTTAAT TCATAAAATA ATAACCGAGT AG
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| Protein sequence | MRMIDIIEKK RDGKSLTKEE IEFFVNGYTH GEVPDYQASS LAMAIFFQDM NDEERAALTM
SMVNSGEKID LSDINGIKVD KHSTGGVGDT TTLVLAPLVA AVGVPVAKMS GRGLGHTGGT
IDKLESVKGF NVEISEKDFI KLVNDNQVAV IGQSGNLTPA DKKLYALRDV TGTVNSIPLI
ASSIMSKKIA AGADAIVLDV KTGSGAFMKT LDDAEALAHA MVRIGNNVGR NTMAIISDMS
QPLGNAIGNA LELKEAIATL KGNGPKDLTE LVLTLGSQMV VLAEQATSLD EARQMLIDAI
KTGKALNKFK TFLSNQGGDD SIVDSPEKLP SAKYQVEFKA KKDGYITEII ANEIGVASMM
LGAGRQTKED VIDLGVGIVL NKKVGEHVEK GENILTIHTN TKEIDDILYK LDNSITIESK
GEAPTLIHKI ITE
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