Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1740 |
Symbol | |
ID | 3242737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1779706 |
End bp | 1780890 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637168425 |
Product | amidohydrolase family protein |
Protein accession | YP_189304 |
Protein GI | 57867624 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATAATA AACAAAAGAT ATTAGATTTT ATAGAAAATA ATAAATATGA TTATGTTGAA ATAAGTCATC GTATTCATGA ACGCCCTGAA TTAGGCAATG AAGAAATTTT TGCATCGAGA ACATTAATTG ACCAATTAAG AGCAAATCGA TTCGAAATCG AAACGGATAT TGCAGGACAT GCAACAGGAT TTATAGCAAC GTATGATTCT GATATGACTG GACCGGTTAT AGGATTTCTA GCTGAATATG ATGCTTTACC TGGTCTTGGT CACGCATGCG GGCATAATAT TATTGGTACT GCTAGCGTAC TTGCTGCAGT AGCACTAAAA GAAGTCGTCG ATGAAATTGG TGGTAAAGTA GTCGTTTTGG GATGTCCTGC TGAAGAAGGT GGGGAAAATG GCTCCGCAAA AGCTTCTTAT GTTAAAGCAG GTGTCATTGA TGAAATTGAT GTAGCATTGA TGATTCATCC TGGAAATGAA ACTTATCGTA CAATTAATAC TTTAGCTGTG GATGTTCTAG ATATTAAATT CTATGGACGT AGTGCGCATG CATCTGAAAA TGCAGATGAA GCATTAAACG CTTTAGATGC AATGATTTCA TATATTAATG GTATAGCACA GTTAAGGCAA CACATTAAAA AAGGACAACG AGTTCACGGG GTTATTTTAG ACGGTGGTAA AGCGGCTAAT ATTATACCTG ATTTTACACA TGCGAGATTT TACACTCGAG CTACTTCGCG GAGAGAACTT GATGTTTTAA CTGAAAAAGT AAACCAAATT GCAAGAGGTG CTGCTATTCA AACTGGGTGT GATTTTGAAT TTGGTCCTAT CCAGAATGGT GTAAACGAAT TTATCAAAGC ACCTAAACTT GATGATTTAT TTGAAAAATA TGCAACTGAA TTAGGAGAAG AAGTGATTGA TGATGATTTT GGCTATGGAT CTACAGATAC AGGTAATGTA AGTCATGTTG TACCAACAAT ACATCCACAT ATTAAAATTG GTTCTCGAAA TCTTGTAGGA CATACCCACC GCTTTAGAGA AGCGGCTGCA AGTTTACAAG GTGATCAGGC ACTCATTCGA GGTGCAAAAA TTTTAGCATT AATGGGACTA GAATTAATCG AAAATAAACC GTTGTTAGAC GAAATAATTG AAGAGCATAC GCATATAAAG GGGCATGTTA AGTAA
|
Protein sequence | MHNKQKILDF IENNKYDYVE ISHRIHERPE LGNEEIFASR TLIDQLRANR FEIETDIAGH ATGFIATYDS DMTGPVIGFL AEYDALPGLG HACGHNIIGT ASVLAAVALK EVVDEIGGKV VVLGCPAEEG GENGSAKASY VKAGVIDEID VALMIHPGNE TYRTINTLAV DVLDIKFYGR SAHASENADE ALNALDAMIS YINGIAQLRQ HIKKGQRVHG VILDGGKAAN IIPDFTHARF YTRATSRREL DVLTEKVNQI ARGAAIQTGC DFEFGPIQNG VNEFIKAPKL DDLFEKYATE LGEEVIDDDF GYGSTDTGNV SHVVPTIHPH IKIGSRNLVG HTHRFREAAA SLQGDQALIR GAKILALMGL ELIENKPLLD EIIEEHTHIK GHVK
|
| |