Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1690 |
Symbol | ddl |
ID | 3242727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1733954 |
End bp | 1735027 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168376 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_189255 |
Protein GI | 57867614 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.820491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAG AAAATATTTG TATCGTTTTT GGAGGTAAAA GTGCAGAACA CGATGTTTCA ATTTTAACTG CACAAAATGT TTTAAACGCA ATTGATAAAG AACGATATCA AGTTGATATC ATTTATATAA CAAACGATGG TGAATGGAAG AAAAAAGATA ATATTACACA AGAAATAAAA AATACTGATG AACTCGTCAT TAACGATGTA GAGACTGGAG AAATCTCACA GTTACTCAGT AAAGGTAGTT TAGGAAAATC ATATGATGCA GTATTCCCAT TATTGCATGG TCCAAATGGA GAAGATGGAA CTATCCAAGG TCTTTTTGAA GTACTTGATA TACCATATGT AGGTAATGGT GTGTTAGCTG CTTCAAGCTC AATGGATAAA CTCGTGATGA AACAATTATT TGAGCATAGA GGTTTACCTC AATTACCTTA TATTAGCTTT TTAAGAAGTG AGTATGAAAA ATATGAAAAT AATATCATTA AATTAGTTAA TGATAAGTTA ACATATCCGG TATTTGTAAA ACCTGCTAAT CTCGGTTCAA GTGTTGGTAT AAGTAAATGT AACAATGAAG AAGAATTAAA ATCTGGGATA GCTGAAGCAT TCCAATTTGA TCGTAAACTT GTCATTGAAC AAGGGATTAA TGCTAGAGAG ATCGAAGTAG CTGTCTTAGG TAACGATTAT CCTGAAACGA CATGGCCTGG TGAGGTTGTT AAGGATGTAG CGTTTTATGA TTATAAATCA AAGTATAAAG ACGGTAAGAT TAGATTAGAT ATTCCAGCAG ATTTAGATCA AGATGTTCAA ATGACATTAA GAAACATGGC ATTAGAGGCC TTTAAAGCTA CTGATTGTTC GGGATTAGTT CGTGCAGATT TCTTTGTTAC TGATGATAAT CAAATTTATA TTAATGAAAC AAATGCCATG CCAGGATTTA CTGCATATAG TATGTATCCA AACTTATGGA AAAATATGGG CTTATCTTAC CCTGATTTAA TTGCTAAATT GATTGATTTA GCTAAAGAAC GTTATGAAGA TAAAAAGAAA AATAAATATA AAATTGATTA TTAG
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Protein sequence | MTKENICIVF GGKSAEHDVS ILTAQNVLNA IDKERYQVDI IYITNDGEWK KKDNITQEIK NTDELVINDV ETGEISQLLS KGSLGKSYDA VFPLLHGPNG EDGTIQGLFE VLDIPYVGNG VLAASSSMDK LVMKQLFEHR GLPQLPYISF LRSEYEKYEN NIIKLVNDKL TYPVFVKPAN LGSSVGISKC NNEEELKSGI AEAFQFDRKL VIEQGINARE IEVAVLGNDY PETTWPGEVV KDVAFYDYKS KYKDGKIRLD IPADLDQDVQ MTLRNMALEA FKATDCSGLV RADFFVTDDN QIYINETNAM PGFTAYSMYP NLWKNMGLSY PDLIAKLIDL AKERYEDKKK NKYKIDY
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