| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1686 |
|---|
| Symbol | |
|---|
| ID | 3242716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1728531 |
|---|
| End bp | 1730036 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637168372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_189251 |
|---|
| Protein GI | 57867603 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3428] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGTC CGCAAAAGCT ACATCCAATT TCTTATATTG ATGGCTTGAT TAGTGTGATT
AAATCAAATT TCATTGTAAT TATCATCTTT TTATTTAATA TAAAAGATTT TAAATATGAT
GATTTTTCGT CTTATATTAT TCCAGGTATA ATGACTTTGA TATTTTCTAT CGGTTTCATT
CATAATATTA TTAAGGTTTA TAATACACGA TATTGGATTG AAGAGGATCA TTTTATATTA
ACTACTGGTG TTTTTAATAA GGAACGAAAA GAACTAAATA TTAGTCGCAT ACAATCTGCA
GATACGTCTC AAGGATTGAT TAATCAGATT GTTGGCGGCG TTGAACTCAT TATTAAAACA
CCAAGTGATG GCATAGAATT AGGGACAATT TCAAAAAAGC AAAGTGAAGT TATTGAACAA
GAATTGCGAT CTATTCAAGA ACGCATGAAT AACCAGGTAA ATCAAGAAGC TAAAGAGTTA
AATGATGAGA ATCATACTCA GACATATCAA CAACATGCCA AACCCCAATA TGCAATATTT
AAAATGCCTT TTAAACAACT ATTATTTATG TCTATGACAA GTGGAGCTAT AGCACTTGCT
TTTGTGACAC TATCTCCTAT TATTGGCAGT CTCTCAAGTG TTATTCCATG GGATAAATTT
GGTGAAGAAA TATCTTCTGT ATTTAAAACG ATATATTTCA TTGTCATTTT TATTGTCATA
CTAGTGTTAT TATTAAGTTA TATAATCGGA ACTATCATGT ACTTAATAAA GTTTTATGGA
TATCAAGTTA TTCAAGATAA TCATCAACTT AAAATTCAAT ATGGATTATT TACGAAGAAA
AATATCACTG TACCAACTGA CCGACTGCAA GGTGTACTTG AACATCAATC TTTTATACGA
AAATTATTTG GTTATACATC TATACATTTC TATATTACAA GTGATATAGA TACTACTGAA
GGGGAACCCA CTGATAATGA TGGAAGAATT ATGATTTTAC CGTTTATTCC AAGAAAAGAG
GCATATAAAG TGATTAGACC TTTGGTTCCT GAGATGACAT TTAATCATGC TAAAATTGGC
ATGCCTTTAA AAGGATTTCA TCGTCACTTT CTAATTCCTT CCATATGTAT TATTGGTATA
GGCATTATTG GATGGTATAT GTGGTCTTTA TGGTCTTTAA TCATAGCTTT ATTACCAATC
TTATTATTTT TTGTTTACGC TATACTTTAT ACACGTTTTA GTGGTTTTGC TTTTAGCGAA
TCAGAGCTTG TTGTCCAAAA AGCGTCTATA TTAAATATTA AGAGATTTTA TGTTAAAAAA
GAAAAAGTTT TAGGAATGAC TATTAGCCAA CATCCCTTTC TTGAAAGAAG TCAACTCGCA
AATTTTCAAT TTGTTATTGC TAAGGGTAGT AGTCAGCAAA ACATTGGTTT GAAGTTTAGT
GAAGTAGATA ATGTTCTTAA ACTCAAAAAT TGGTACATGA AAGGTGATAC TCATGAAGTC
TTATAA
|
|---|
| Protein sequence | MYSPQKLHPI SYIDGLISVI KSNFIVIIIF LFNIKDFKYD DFSSYIIPGI MTLIFSIGFI
HNIIKVYNTR YWIEEDHFIL TTGVFNKERK ELNISRIQSA DTSQGLINQI VGGVELIIKT
PSDGIELGTI SKKQSEVIEQ ELRSIQERMN NQVNQEAKEL NDENHTQTYQ QHAKPQYAIF
KMPFKQLLFM SMTSGAIALA FVTLSPIIGS LSSVIPWDKF GEEISSVFKT IYFIVIFIVI
LVLLLSYIIG TIMYLIKFYG YQVIQDNHQL KIQYGLFTKK NITVPTDRLQ GVLEHQSFIR
KLFGYTSIHF YITSDIDTTE GEPTDNDGRI MILPFIPRKE AYKVIRPLVP EMTFNHAKIG
MPLKGFHRHF LIPSICIIGI GIIGWYMWSL WSLIIALLPI LLFFVYAILY TRFSGFAFSE
SELVVQKASI LNIKRFYVKK EKVLGMTISQ HPFLERSQLA NFQFVIAKGS SQQNIGLKFS
EVDNVLKLKN WYMKGDTHEV L
|
|---|
| |