| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1677 |
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| Symbol | rpoF |
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| ID | 3242700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1722805 |
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| End bp | 1723575 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637168363 |
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| Product | RNA polymerase sigma factor SigB |
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| Protein accession | YP_189242 |
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| Protein GI | 57867587 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02941] RNA polymerase sigma-B factor
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAG AGTCGAAATC AGCTAGTGAA GTATCACCTG AACAAATTAA CCAATGGATT
AAACAACATC AAGAAAACGA AGATAGCCAA GCTCAAGATA AATTAGTAAA ACATTATCGT
AAGCTGATTG AATCTTTAGC TTATAGGTAC TCTAAGGGAC AATCACATCA TGAAGATTTA
GTTCAAGTTG GTATGGTTGG TCTAATAGGT GCTATTAATA GATTTGATTT ATCATTTGAT
CGTAAGTTTG AAGCCTTCTT AGTACCAACA GTTATTGGTG AGATTAAAAG ATATTTACGA
GATAAAACAT GGAGTGTTCA TGTACCTAGA CGTATTAAAG AAATTGGTCC AAGAATCAAA
AAAGTTAGTG ATGAATTAAC AAATGAACTT GAACGTTCAC CATCTATTAG TGAAATCGCA
CAACGCTTAG AAGTTTCAGA TGAAGAAGTT TTGGAAGCGA TGGAGATGGG GCAGAGTTAC
AATGCCCTGA GTGTGGATCA CTCTATAGAA GCAGATAAAG ATGGTTCGAC AGTTACATTA
TTAGATATTA TGGGACAACA AGATGATAAT TATGATTTAA CGGAAAAACG TATGATATTA
GAACGTATTT TACCTATTTT GTCAGAGAGA GAAAGACAAA TCATACAATG TACTTTTATT
GAAGGTCTTA GCCAAAAAGA GACTGGTGAA AGAATTGGTC TTAGTCAAAT GCATGTTTCA
CGTTTGCAAC GTACCGCAAT AAAAAAATTA CAAGAAGCTG CAAGACAGTA A
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| Protein sequence | MAKESKSASE VSPEQINQWI KQHQENEDSQ AQDKLVKHYR KLIESLAYRY SKGQSHHEDL
VQVGMVGLIG AINRFDLSFD RKFEAFLVPT VIGEIKRYLR DKTWSVHVPR RIKEIGPRIK
KVSDELTNEL ERSPSISEIA QRLEVSDEEV LEAMEMGQSY NALSVDHSIE ADKDGSTVTL
LDIMGQQDDN YDLTEKRMIL ERILPILSER ERQIIQCTFI EGLSQKETGE RIGLSQMHVS
RLQRTAIKKL QEAARQ
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