Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1621 |
Symbol | |
ID | 3240598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1646288 |
End bp | 1646617 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168302 |
Product | DNA-binding protein HU, putative |
Protein accession | YP_189186 |
Protein GI | 57867550 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000303711 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT TAGCTAAAAA AGATTTAATT AACGAATTAC AAGAAAGTGC TCGTGTACGT GGTTTAGAAA TCACTAAAAA AGACGCTGCA ACATTATTCT CAGCATTTGA AGACACAGTA ATTGAAGCAA TTCACGCTGC TGATGAAGTT GGTTACGATA GCTTCTCAAC AAACTTTGGT ACATTCAAAA TTGTTGAAGT TTCAGAAAAA TCTGGTGTAT CACGCTTAGG TGGAGAAGAA AAATTTTGGA CATCACCAGC ACACAAAACA GTTCGTTTTA AATTAAATAA ATCAGTTAAA GATAAATTAA AAGCAGAAAC TTCTAAGTAA
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Protein sequence | MTKLAKKDLI NELQESARVR GLEITKKDAA TLFSAFEDTV IEAIHAADEV GYDSFSTNFG TFKIVEVSEK SGVSRLGGEE KFWTSPAHKT VRFKLNKSVK DKLKAETSK
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