Gene SERP1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1621 
Symbol 
ID3240598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1646288 
End bp1646617 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content32% 
IMG OID637168302 
ProductDNA-binding protein HU, putative 
Protein accessionYP_189186 
Protein GI57867550 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000303711 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT TAGCTAAAAA AGATTTAATT AACGAATTAC AAGAAAGTGC TCGTGTACGT 
GGTTTAGAAA TCACTAAAAA AGACGCTGCA ACATTATTCT CAGCATTTGA AGACACAGTA
ATTGAAGCAA TTCACGCTGC TGATGAAGTT GGTTACGATA GCTTCTCAAC AAACTTTGGT
ACATTCAAAA TTGTTGAAGT TTCAGAAAAA TCTGGTGTAT CACGCTTAGG TGGAGAAGAA
AAATTTTGGA CATCACCAGC ACACAAAACA GTTCGTTTTA AATTAAATAA ATCAGTTAAA
GATAAATTAA AAGCAGAAAC TTCTAAGTAA
 
Protein sequence
MTKLAKKDLI NELQESARVR GLEITKKDAA TLFSAFEDTV IEAIHAADEV GYDSFSTNFG 
TFKIVEVSEK SGVSRLGGEE KFWTSPAHKT VRFKLNKSVK DKLKAETSK