Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1618 |
Symbol | |
ID | 3240595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1641200 |
End bp | 1642075 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637168299 |
Product | hypothetical protein |
Protein accession | YP_189183 |
Protein GI | 57867547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00141601 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA AGCACTTACT AACTGAAGAA GAGATTAGAA ACATTAGAAG AGAAATATTT AAAAATAATG GCAAAGTTGT GATACCGAGA GGTGTCATAA CTTATCTTAA AAATAAAAAA ATGAGCGTAT CAACTAAAGG TAAAATACTA TATGCTTATA TTGGTATAAT ACTGTGCTAT CATAATGCTT ACCATACATA CAGAAAACAT CATATGCACT TATCAAATAT TCTAGATGTT ATGAATATTG GTTGGAGTAA ATTAGTTAGA AAAGAGTTTA CTAAATCAGG GTTTTTTGAA AAAGAAGGCT ATATTACTCA TCAAAATTAT TTACCGTTGT GGTATGAGTT ATCTAAGACA AAAAGCAAAG ACAATAAAGA AGTCATATTC GCTAATCATA AAACAACTAA TGATTTAACT CGTGATGAAC TATTGGAAAA AGTTAATAAC TATGAGAACA GATACAAAAT CTGTATTGAA CCCACTTTAC ATATTTATGG CAAGAAAGTT AAAAAAGGAA GAGGATATCA AATTAAACAA CAACCTCTAA ATATTGAACC AGTAGACTAT ATCATGTTTG ATTTAAAGAC CATTGAGAAG GTGTTAACTG GTGAATTATC AAGTGGAGCA TTATTTTACA TAGCCTATTT AAAAGGCATT ACTGGAAACA ACAACATAAC AGACAAAGAC AAGTTTAAAA CGTCAATAAG TCAAATAGCA GTGGGTTTAG ATATAACAGA GATAACAGCG AGAAAATTTC ATAAAGAAAT AAGAGATAAT TTTGGTGAAA AATATTATAA ATTAAATCAA GTGACTAAGA AATATAATGG TGGTTTAATT AGTATTGTGT ATTTGAATTT ATCTAGGGAA ATTTAA
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Protein sequence | MEEKHLLTEE EIRNIRREIF KNNGKVVIPR GVITYLKNKK MSVSTKGKIL YAYIGIILCY HNAYHTYRKH HMHLSNILDV MNIGWSKLVR KEFTKSGFFE KEGYITHQNY LPLWYELSKT KSKDNKEVIF ANHKTTNDLT RDELLEKVNN YENRYKICIE PTLHIYGKKV KKGRGYQIKQ QPLNIEPVDY IMFDLKTIEK VLTGELSSGA LFYIAYLKGI TGNNNITDKD KFKTSISQIA VGLDITEITA RKFHKEIRDN FGEKYYKLNQ VTKKYNGGLI SIVYLNLSRE I
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