Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1600 |
Symbol | |
ID | 3241632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1628607 |
End bp | 1629887 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637168281 |
Product | hypothetical protein |
Protein accession | YP_189165 |
Protein GI | 57867511 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000500493 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAG AAGATGTATT GATCAATATT GTTTCAGAAT TAAGAAATCA AAAAGATGAT ACAGCAATCG AGAAAATTGC TACAAATATG GAAAATAATT ATAAAATTCC AAAAGGGCTA ACTTATTCAT TTACTTCAAG AGACTTGGAT AGAAACTTCT TTGATACAAC TGATTTAAGA TTGATTACTT TGTATATTAT GGAAGCCTTT AAAGTTCTTG GAAGAGAAGA AATGCTTGAA GATTATATAC CAAAAGGAGA ACAACAAGAA GCTAAACAAT ACGATTTTTT AGCATATAAC AAAGCTGATG AAGTTACTTT ACCTTATGAA TTTACACCAA CTCTACCAGT AAATGACGTT TACAGTACGA AAATGTCGGT GAAAGAGTTA GGAGCATTCA TGAATAGTGG TATTATTAAT TATAATTTTG ATATTCAAAG AGAAGCAAAA TTGGAAATAC GAACTGGTGA AATAATAAAA ACACCTAATA TCAACGAGAG AAATGTTAGA GAAATGGTAA ACCATTTATT AAATGATAGT CTTAAAGAAA GTACAATCTA TTTAAACGCT GCTCCAACGA CTAGTAGTGT AGGTGATGAA TTGATTTACG ATAACTCAAC GTACACATTA ATAGTCACTG AAGATACAAG AATAGATGTA TTAGATGGTT TCCACAGACT TTTAGCAGTT CAAAGAGCAT TACGTGAAAA CCCTATGATC GAATTTGAAT TCAACGTAGT ATTTAGTAAC TTCACCACTT CTGAAGCAAT CAAATGGCAA GCTCAACATT CAAAAGCAAC TGCGTGGTCT AAAAATAGAA TAAGTGAAAT GCAATTAGAA AATCGAGCTT CAAAAGTAGT AAAAGCAATT AAAAATTCGG ATCATGAATT TAGTTATTTA ATTTATACAG GATCAAGATT AAAAAATGAT AAATCATTGA TAACTTTCAA TAATCTTACT AATATTATAG ATGAAATGTA TACTTTAAAT AGTAGAAAAG AAGAAGTTAT TCTTGCTGAG AAACTTAGCA AAATACTTTC AAGAGTTAAT GAGTTAAAAC AATACTCAAA CACTTTGAAA TCTCAATATT ATGTATACGC ATTTATTAAA TTGTTTAAAG AAAAATACAA CAATGATGTT GATGAATATC TTCATTTATT GGATAAATTG GAAGAATACC TTAAAAATAA TGATTTCAAT TTCACTTTAC AAAACACAAA GGAAAAGTTG GTCAAGGAAG AAACGTATTC TAAAGTATTA GAATTGTGCA AGGAGACATA G
|
Protein sequence | MNKEDVLINI VSELRNQKDD TAIEKIATNM ENNYKIPKGL TYSFTSRDLD RNFFDTTDLR LITLYIMEAF KVLGREEMLE DYIPKGEQQE AKQYDFLAYN KADEVTLPYE FTPTLPVNDV YSTKMSVKEL GAFMNSGIIN YNFDIQREAK LEIRTGEIIK TPNINERNVR EMVNHLLNDS LKESTIYLNA APTTSSVGDE LIYDNSTYTL IVTEDTRIDV LDGFHRLLAV QRALRENPMI EFEFNVVFSN FTTSEAIKWQ AQHSKATAWS KNRISEMQLE NRASKVVKAI KNSDHEFSYL IYTGSRLKND KSLITFNNLT NIIDEMYTLN SRKEEVILAE KLSKILSRVN ELKQYSNTLK SQYYVYAFIK LFKEKYNNDV DEYLHLLDKL EEYLKNNDFN FTLQNTKEKL VKEETYSKVL ELCKET
|
| |