Gene SERP1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1523 
Symbol 
ID3240793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1582329 
End bp1583336 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content33% 
IMG OID637168204 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_189088 
Protein GI57867437 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00206279 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATACT TGATTAAAGT ATTAGAACTT TTTAGTGGAG TAGGCAGCTT CTCAATATCC 
CTAAACACTT TAGGAATTGA ACATGAAATT GTTGGTTTTA GTGAAACAAG AAAAACTGCT
ACTCAACTAT TTTGTAAATT ACATAATAAA AAAGAAAGCG AAAATCTTGG AGATGTTAGA
AACGTCTCAG CAAAAGATTT AGATGTAGAC TTACTAGTAT TCGGTAGTCC ATGTCAAAGC
TTCACAAGGG CTGGTAAGCA AGGTGGAGGA CTTAAAGGTT CAGATACTCG ATCAGCTCTG
ATGTGGGAAG CAGTCAGGAT AATGGAAGAA TGTAAGCCTA AGTGGATAGT TTGGGAAAAT
GTTCCAGACG CAATAAGTAG AAAAAACATG CCTAACTTCC AAAATTATAT GGATGAGCTT
GATAGCTTAA ATTACAATAC ATATTATAAA GTTCTAAATG CACATGAATT AGGTTCAGCT
CAAAAGAGAA AACGTTTATT TTCAATATCT ATTAGAAAAG ATATAGACAA TGGTAAATTT
GAGTTTCTTG ATTTAACAAG GGAACCTAAA CATTTAGAAA CATACTTAGA AAATAATGAT
CAACCAGATA TCGCAAACGA ACATATACAT AGTCATCTTA TACTTGGTAA AGATGAGAAC
GGTTATAAAA TTAAAAATGG TACTAAGAAA GGATATTTAT ACGCAAATAA TGGAGACGGA
ATTGACTTAG CTTATGTTAC TTCTAAAGCT AGAAGAGGAC GAGTACAGGT TAAAGCTTGT
CAAACAATCA TGCGTGGTAA GACTTTAGGA ACAATAAATG ATGGTGTATT AAGGTTCTAT
TCTCCTAGAG AATATTGGAG ATTACAAGAA ATGCCAGATG AATTATATAA ACATGTCGAG
GCATGTAACT TCAAACCTAG TACAGCTTAT GATGTTGTAG GTGGAGTGAT CAATCAGTTA
CATCTTAAAA CAGTGTTCTT ATCGTTGAAA AAAGCATTTA ATTGGTAA
 
Protein sequence
MTYLIKVLEL FSGVGSFSIS LNTLGIEHEI VGFSETRKTA TQLFCKLHNK KESENLGDVR 
NVSAKDLDVD LLVFGSPCQS FTRAGKQGGG LKGSDTRSAL MWEAVRIMEE CKPKWIVWEN
VPDAISRKNM PNFQNYMDEL DSLNYNTYYK VLNAHELGSA QKRKRLFSIS IRKDIDNGKF
EFLDLTREPK HLETYLENND QPDIANEHIH SHLILGKDEN GYKIKNGTKK GYLYANNGDG
IDLAYVTSKA RRGRVQVKAC QTIMRGKTLG TINDGVLRFY SPREYWRLQE MPDELYKHVE
ACNFKPSTAY DVVGGVINQL HLKTVFLSLK KAFNW