Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1513 |
Symbol | |
ID | 3241225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1575579 |
End bp | 1578488 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168194 |
Product | truncated ribonucleoside-diphosphate reductase 2, alpha subunit |
Protein accession | YP_189078 |
Protein GI | 57867420 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR01443] intein C-terminal splicing region [TIGR01445] intein N-terminal splicing region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000128379 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGTAAAT GGATCGAAAA AAACAATGAA ATCATGAGAA GAGATGAGTT AGGACAGCTT AGCTTATCAA AAGACAAAGA AGCAATTAAG TTATATTTAG AACACATTAA GAGTAAAACA AAGCAATTCT CAAATCAGAT TGCAAGATTA CGTTACTTAG TAGAAGAAGA TTACTATATT GATGTATTTA AAGATTACAG TGAAGAAACA TTATTAGAGC TTTTAGATTA TGCTTATTCA TTCGGCTTTG AGTTCCAAAG CTTCATGGCA GCAAGCAAAT TCTATGATAC ATACGCATTA AAAACTAGAG ATAAGTCGCA ATGGCTTGAA GACTTTGAAC AACATAACGT AATCGTTTCT CTGTACTTAG CTGGTGGAGA TGTTGATTTA GCTAAAAGAT ACATTAAAGC ACATACACTT CAAACAGTAC AAACAGCAAC TCCAACATAT TTAAATGCTG GTCGTAAGCA ACGAGGAGAA TTAGCTTCTT GTTATTTATT CACAATGGAT GACACATTAA ACTCTATCAA CTTCATTAGA AGTCAAGTAT CACAAGCTAG TAAGATTGCT GGTGGTGTAG CAGTTAACTT AACACGATTA AGAGGTCGTG GTGCTACATT AAAAGGTGTT AAGAATGTAG GTAAAGGTAT CGTACCAGTT GCTAAATTAA TTGAAGGTGA AGTTAGTTAT GCTGATCAAT TAGGTCAACG TGCTGGAGCT GGTGCTGCTT ACTTAAACAT TTTCCACTCA GATGTAATTG AGTTATTAAA CACTAAGAAA GTTAATGCAG ATGAAGATAC ACGTTTAGCT ACACTTTCAA TCGGTTTAAT TGTTCCTTCA TTATTCTTTG ATTTAGCAAA AGAAGACAAA GACTTATATA TGTTTGAACC ATACTCAATT CAAGAAGAAT TCGGTAAAGA TGTAATCTTA GATGACATTA ATATTAATGA TTGGTATGAC AAGTTCGTTG AGAATGAAAA TGTTATCAAA CATAAAATTA ATGCTAGAGA AATGTTAAAT CTGATCGCTC AAATTCAATT ACAATCTGGT TATCCTTATA TCATGTATAA AGATAACGCA AACAAAAACC ATGCTTTAAA TGAGCTTGGT GAAATCAAAA TGTCTAACTT ATGTGTTACT GGAGACACTG AGTTATTAAC TGAAAAAGGT TATGTGAAAG CCAAAGACTT GTATGAAAGT CAAGAAGATT TGAAAGTAGT AATTGATAAT AGAACTAAGA ATTATGATAT TAACAATAAA GGTACTGATA TCGTAAATGC TATTCCAATG CAACTTACAG CTAAACAAGC TGAAATTTAT GAAATTACTA CTAAACAAGG GTTTAAAATT AAATCTACCG AATGGCACAA ATATTATAGA AAAATAAACG ACTCAATTGA AAAAGTTCAG TTAAATCAAT TAGAGGTAGG AGATAAGCTA TTAGTTCAAT CTGGTAATGG AAGTTATGGA GATTTTCATG ATCCAAAATT AGCATTCTTG ATGGGGCTTA TCGCTGGAGA TGGGACATTT GGAAGAGACG GTTCAGTTAA AATTTATCTA TATCACGAGA AGCAATATCT TAAAGAAACT ATTGAAGAAT TAGTAGCTTA TATTATAGAT AAATATAGAA ATAAAAATGA GTTTTTACAT CATAGTGCAA ACTTACATCC TAAATTTGTT GAAAATAAAG AACTACAAAA ATTAACAATT AGCAGTGTTG AGCTATACAA AATATTATCT AGATTTGGAT TTAACAGAGA GACTAAATTG AGATTTCCAA ACTTATTAAA AAATGCTACA AAAAATACAA TAACTGCTTA TTTATCTGGC TTATATCAAA TGGATGCTTG CGTAAATACA AATGAAAAAT ATAAAGCAAT GAGCATCGAA TTGACAACAA TCAGTGAAGA ATTAGCAAGA GATATTCAAA TGCAACTGTT AAATCTCGGT GTGTATTCAT CAATATATCA AAGTGAGAGA GAGATAAGCT TATTACCAGA TGGTAATGGC GGCATGAAAG AGTACAAAGT TCAAAATACA TATAAAATTA GCATTCAAGA CAGAAGCTCA AGAGATTTGT TTATGAAAGA AGTAGCTTTG AAACCTAAAG ATATACATAA AGCAATGATT TTTAACTTAA CATTGCGACC AAATAGTAGA AAACCGAAAC ATGATTTTAC TGCCGAAATT ACTGAAATTA AATATATTGG TAAAGAAGAT GTTTATGATA CCACACAAGA AGATTATCAC TCATTAATCT TCAATGGAAT TGTGACAGGA AATTGTACTG AGATCTTCCA ATACATGCAT GTTTCAGATA TCAAAGATTA CTACGAACCA GATGAATTAG GTCAAGATAT TATCTGTAAC TTAGCTTCTC TTAATATGGT TAAATCAATC GAAGAGAAAG AAATTGAAGA GTCAATTCGT ACTGGAATGA GAGCTTTAAC GTTTGTAGCT AACAATTCAC GTATCGAACA CTTACCAACA GTTCATAAAG CAAATAAAAA CAATAGAGCA GTTGGTTTAG GTGTAATGTC ATTCCATAGT ATGTGTGCTA AAAACAAAAT TAGATATGGT TCAGAAGAGT CACTTGATTT GCTAAATGTT TACTGCATGA TGATGGACTA TTATTCATTA GACGAGTCAA TGAAGATTGC AGTTGAAAGA AATGACAAAT TCTATGGCTT TGATCAAACA GATTATAAAG CTAAAGATGG AAAAGAGTTT GGAGAATACT TCTATAAAAA CAATCGTGTA ACTAAGAATG TAGAACCAAT TACTCCGAAA GTTAAAGAGA TTTTTAAAGG TATTTACATT CCTACTAAAG AAGACTGGCA ACGGTTAGCT AGAGAAGTTG ATAAGAATGG TTTATATAAC TCATATAGAT TGTCAATCGC ACCTTATTGA
|
Protein sequence | MSKWIEKNNE IMRRDELGQL SLSKDKEAIK LYLEHIKSKT KQFSNQIARL RYLVEEDYYI DVFKDYSEET LLELLDYAYS FGFEFQSFMA ASKFYDTYAL KTRDKSQWLE DFEQHNVIVS LYLAGGDVDL AKRYIKAHTL QTVQTATPTY LNAGRKQRGE LASCYLFTMD DTLNSINFIR SQVSQASKIA GGVAVNLTRL RGRGATLKGV KNVGKGIVPV AKLIEGEVSY ADQLGQRAGA GAAYLNIFHS DVIELLNTKK VNADEDTRLA TLSIGLIVPS LFFDLAKEDK DLYMFEPYSI QEEFGKDVIL DDININDWYD KFVENENVIK HKINAREMLN LIAQIQLQSG YPYIMYKDNA NKNHALNELG EIKMSNLCVT GDTELLTEKG YVKAKDLYES QEDLKVVIDN RTKNYDINNK GTDIVNAIPM QLTAKQAEIY EITTKQGFKI KSTEWHKYYR KINDSIEKVQ LNQLEVGDKL LVQSGNGSYG DFHDPKLAFL MGLIAGDGTF GRDGSVKIYL YHEKQYLKET IEELVAYIID KYRNKNEFLH HSANLHPKFV ENKELQKLTI SSVELYKILS RFGFNRETKL RFPNLLKNAT KNTITAYLSG LYQMDACVNT NEKYKAMSIE LTTISEELAR DIQMQLLNLG VYSSIYQSER EISLLPDGNG GMKEYKVQNT YKISIQDRSS RDLFMKEVAL KPKDIHKAMI FNLTLRPNSR KPKHDFTAEI TEIKYIGKED VYDTTQEDYH SLIFNGIVTG NCTEIFQYMH VSDIKDYYEP DELGQDIICN LASLNMVKSI EEKEIEESIR TGMRALTFVA NNSRIEHLPT VHKANKNNRA VGLGVMSFHS MCAKNKIRYG SEESLDLLNV YCMMMDYYSL DESMKIAVER NDKFYGFDQT DYKAKDGKEF GEYFYKNNRV TKNVEPITPK VKEIFKGIYI PTKEDWQRLA REVDKNGLYN SYRLSIAPY
|
| |