| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1510 |
|---|
| Symbol | nrdF |
|---|
| ID | 3241214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1572986 |
|---|
| End bp | 1574008 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637168191 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_189075 |
|---|
| Protein GI | 57867410 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0531925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGAG AAATTAAAGC AAGAGCAACA AACTGGGACA AAGATAATTC AATAGCGTTA
ACTTATTGGA AACAAAATGT AAAACAAATG TGGACTGAAG AGGAATTCAA ACCTTCTAAA
GATTTAAGTG TTTGGAAGAC ATTATCTGCG GATGAACAAG AAACTTATGT TAAAGCACTA
TCAGGTTTAA CAGGTTTAGA TACAACACAG GGAACTGAAG GAATGCCTTT ATTGGCTTTC
CACTATCCCG AAGAGATTTG GAGAGGAGTA TTTGCATTTA TGTCTATGAT GGAGAATATT
CATCATAAGT CGTATTCACA TATCTTTACT TCACTACTTG AGAGAAAAGA TACTCATTAC
TACTTAAAAG AGTGGGTACC AGCAAATAAA TATCTAAACA AAAAGACAAA ATTGATTACA
ACTAACTATT ATAAATTACT TAAACCAAAC CCTACTGATC GTGAAATTTA TGTAGCAATG
GCTTCATCAA TTTTCTTAGA GTCATTCTTA TTCTTCTCTG GTTTCTACTA TCCATTGTAT
TTAGCTGGAC AAGGTAAAAT GGTTCACAGT GGAGAAATCA TTCGTAAGAT TATCTTAGAT
GAAACTATTC ATGGTAGTGG TACAGGATAT GCAGCTCAAG TTATCTTTGA TAAATTCAGT
AAAGAAGAGC AAGAGGATAT TCGTAAAGAG TTGATGGAAC TATTTGATCA ACTTTACTTC
AATGAGGTTG AATATGCAGC TTCATTATAC GATAAGTTAG GTTTAACTGA AGACGTTATT
CGTTACATTC AATATAACGG TAATCGTGCT TTAATGAACT TAGGTTGGGA GACAGTATTT
AACCCAGAGC CATTTAACCC TATTGTAGAA AATGGTTTGA GAACAGATAC AACTAACCAT
GACTTCTTCT CAGTTAAAGG TGACGGTTAT ACATTAGCAT TAAATCAAGT ACCTTTACGT
GATAAAGACT TTGATTTCAA CAATGTTATT TCATACGAGT TATCTAACAA ATTCTTACAA
TAA
|
|---|
| Protein sequence | MTREIKARAT NWDKDNSIAL TYWKQNVKQM WTEEEFKPSK DLSVWKTLSA DEQETYVKAL
SGLTGLDTTQ GTEGMPLLAF HYPEEIWRGV FAFMSMMENI HHKSYSHIFT SLLERKDTHY
YLKEWVPANK YLNKKTKLIT TNYYKLLKPN PTDREIYVAM ASSIFLESFL FFSGFYYPLY
LAGQGKMVHS GEIIRKIILD ETIHGSGTGY AAQVIFDKFS KEEQEDIRKE LMELFDQLYF
NEVEYAASLY DKLGLTEDVI RYIQYNGNRA LMNLGWETVF NPEPFNPIVE NGLRTDTTNH
DFFSVKGDGY TLALNQVPLR DKDFDFNNVI SYELSNKFLQ
|
|---|
| |