Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1497 |
Symbol | scrR |
ID | 3241186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1563904 |
End bp | 1564857 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168179 |
Product | sucrose operon repressor |
Protein accession | YP_189063 |
Protein GI | 57867382 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.355679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA TATCAGATAT AGCAAAATTA GCTGGAGTAT CGAAAAGTAC TGTTTCACGC TTTTTAAATA ATGGATCTGT GAGTCCAGCA ACGAAAGAAA AAATAACTAA AATAATAGAA GAAAATAATT ATCAGCCAAA TCAATTTGCA CAAAGCTTAA GAGCTCGACG TACCAATTTG ATTGGAGCAA TTATTCCGCG TATGAATTCA TACGCTGTTG ACGAAACGAT TAAGGGTTTG GTACACCAAT GTAATCAACA TCGATATCAG TTATTATTAA ATTACACAGG ATTAAAAATA GATGGTGAAA TTTCGGCACT AAAAACATTA TCACGTAGTA AAGTTGATGG AATCGTGCTA ATGGCAACAC ATATTACTGA AGCGCATATT GAAGTCATTG AGAAAATTGA TGTTCCTGTC ATTATAGTAG GACAAGAACA CGACCGATTA TATAGTATAT ATCACGATGA TTATGAAGCT GGATATAAAA TTGGAGTACT CATTGGTGAA AAAGGTTGTC GAAATGTACA TTTCTTTGGC GTTAGTGAAG AAGATATTGC AGTTGGTATT CAACGTAAGC TGGGAGTTAT TCAAGCGCTG AAGGACTATC ACATAAGTCC GAAAATTTAT GAAACAACAT TTAAGCATGA ACAAGCTTTT AAAGATGTAA GTCAGCAACT TGAAAGAGTA CATGATGCTG ATGCGATAGT TGGAGCAACT GATACCATTG CTTTTGCAAT CCATAAATAT TGCTCTGATC ATCAACAAAG GTTTTACAAT TGTTCAATAT ATGGATTTGG TGGAGACCCT ATGACTCAAA TAGTATCACC TGTCATTCAA ACGGTTAGCT ATAATTACTT TGAAGCAGGA AAGCAAGCAT TAAAAGAAAT TAACCAACTA TTAAAAGGTG AACAAACAAC ATTAAAAATA AAAATTCCTA TCAAATTGAA TTAA
|
Protein sequence | MKNISDIAKL AGVSKSTVSR FLNNGSVSPA TKEKITKIIE ENNYQPNQFA QSLRARRTNL IGAIIPRMNS YAVDETIKGL VHQCNQHRYQ LLLNYTGLKI DGEISALKTL SRSKVDGIVL MATHITEAHI EVIEKIDVPV IIVGQEHDRL YSIYHDDYEA GYKIGVLIGE KGCRNVHFFG VSEEDIAVGI QRKLGVIQAL KDYHISPKIY ETTFKHEQAF KDVSQQLERV HDADAIVGAT DTIAFAIHKY CSDHQQRFYN CSIYGFGGDP MTQIVSPVIQ TVSYNYFEAG KQALKEINQL LKGEQTTLKI KIPIKLN
|
| |