Gene SERP1490 details

Gene Information

• Locus tag: SERP1490
• Symbol: agrB
• ID: 3241947
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 1558381
• End bp: 1558965
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 637168172
• Product: accessory gene regulator protein B
• Protein accession: YP_189056
• Protein GI: 57867368
• COG category: [K] Transcription; [O] Posttranslational modification, protein turnover, chaperones; [T] Signal transduction mechanisms
• COG ID: [COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0305662
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAATCA TCGATAAAAA AATTGAGCAA TTTGCTCAAT ATTTACAACG TAAAAATAAC 
TTAGATCACA TACAGTTTCT AAAAATTCGT TTAGGGATGC AGGTACTAGC GATAAATATT 
GAAAAGTCTA TAGTTGTGTA TGGGCTAGCA ATAATCTTTC ATACTTTCTT TTACACACTT 
TTAACTCATT TAAGTTATTT TTTAATTAGG AGACATGCAC ACGGTACGCA TGCAAATTCG 
TCATTGTTAT GTCATATTCA GAACATAATT TTCTTTATTA TCTTTCCATA CTTAATAATA 
AAGTTAGATA TTAACTATTT TGTTCTTTTA TCTATGGCAT TAGTCGGATT AATTATTACC 
ATTTTATACG CACCTGCAGC AACTAAGAAA CAACCTATAC CTAGACGTCT TGTAAAGCGA 
AAAAAAATAC TCTCCATATT TTTATATTGT ACTATCGTAG TTATTTCATT AGTAACTAAA 
GAACCGGTAA ATAAACTTAT TTTATTCGGT GTAATTTTAG AATCTTTAAC ATTACTACCC 
ATCTTTTTCC CTAAGGAGGA TATTAATCAT GGAAAACATT TTTAA 

 

Protein sequence

MKIIDKKIEQ FAQYLQRKNN LDHIQFLKIR LGMQVLAINI EKSIVVYGLA IIFHTFFYTL 
LTHLSYFLIR RHAHGTHANS SLLCHIQNII FFIIFPYLII KLDINYFVLL SMALVGLIIT 
ILYAPAATKK QPIPRRLVKR KKILSIFLYC TIVVISLVTK EPVNKLILFG VILESLTLLP 
IFFPKEDINH GKHF