Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1486 |
Symbol | |
ID | 3241944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1554224 |
End bp | 1554964 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168168 |
Product | abortive infection family protein |
Protein accession | YP_189052 |
Protein GI | 57867365 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000034413 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGT TATGGGTATC CCTATTAACC GTTCTATTCT ACGGTTTAGC TCAAATACTA CCTGGGTTGG TTTTAGGTAG CCATTTACTT GGAGATATGT CTAAAATGCA AACTGCCCAA ACAATGAGTA TCATGCAAGT ATCTATCTTT ATCATCGCTG CATTGTTAAT CATTTTCATG CAAGCAACCA TTAAAAATCC TACTCAATTA GAACAAGGAC ATAAGGAACC TAAAAGATAT ATTTTCGCCT GGGTTCTATT AGGATTTTGT ATTGTGATGA TTTACCAAAT CATCATCAGT ATAATTTTAT TTGCCATCAA TGGCAGTCCG CAAAGAAGTC CAAACACTGA AAGGTTAATG GCTATTGCTA AGCAAATGCC GATATTTATC GTTTTAATAT CCATAGTAGG TCCCATTTTA GAGGAATACG TTTTTCGTAA AGTTATCTTC GGAGAATTGT ATAACTTTAT AAAGGGATCA CGTGTGGTAA GCTTTATCAT TGCTTCTATA GTAAGTTCTC TAATATTCGC TTTAGCACAT AATGACTTCA AATTTATACC GGTATATTTT GGAATGGGAG TCATTTTCTC ACTTGCTTAT GTTTACACAA AACGAATTGC TGTACCTATA GGCATACACA TGCTTATGAA TGGTTCGGTT GTATTAACTC AAGTTGTGGG TGGAGATTCT ATTAAAAAAT TGCAAGAACA AGCAACATTT ATATTCCATC TTATATTTTA A
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Protein sequence | MKRLWVSLLT VLFYGLAQIL PGLVLGSHLL GDMSKMQTAQ TMSIMQVSIF IIAALLIIFM QATIKNPTQL EQGHKEPKRY IFAWVLLGFC IVMIYQIIIS IILFAINGSP QRSPNTERLM AIAKQMPIFI VLISIVGPIL EEYVFRKVIF GELYNFIKGS RVVSFIIASI VSSLIFALAH NDFKFIPVYF GMGVIFSLAY VYTKRIAVPI GIHMLMNGSV VLTQVVGGDS IKKLQEQATF IFHLIF
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