Gene SERP1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1484 
SymbolgroEL 
ID3241942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1552090 
End bp1553709 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content38% 
IMG OID637168166 
Productchaperonin GroEL 
Protein accessionYP_189050 
Protein GI57867363 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0241945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG ATCTTAAATT CTCTGAAGAT GCGCGTCAAG CAATGTTACG TGGTGTTGAT 
AAATTAGCAA ACGCTGTAAA GGTTACAATT GGACCTAAAG GGCGAAATGT GGTTCTAGAT
AAGGATTACA CAACACCTTT AATTACCAAC GATGGTGTAA CAATTGCTAA GGAAATAGAG
TTAGAAGATC CATATGAGAA TATGGGTGCA AAATTAGTGC AGGAAGTTGC GAATAAAACA
AATGAAATCG CTGGGGACGG TACAACTACA GCAACAGTTT TAGCACAATC AATGATTCAG
GAAGGTCTTA AGAATGTTAC AAGTGGTGCA AATCCTGTAG GCTTAAGACA AGGTATTGAC
AAAGCAGTGC AAGTGGCTAT AGAAGCGCTT CATGAGATTT CTCAAAAGGT TGAAAATAAG
AACGAGATAG CGCAAGTTGG AGCTATTTCA GCAGCAGATG AAGAAATCGG TCGCTACATT
TCTGAAGCAA TGGATAAAGT AGGTAACGAT GGCGTTATCA CTATTGAAGA ATCAAATGGG
TTTAATACAG AATTAGAAGT AGTTGAAGGA ATGCAATTTG ATCGCGGTTA TCAATCACCA
TATATGGTAA CTGACTCAGA TAAAATGATA GCTGAATTAG AACGTCCATA TATATTAGTA
ACGGATAAGA AAATTTCATC ATTCCAAGAT ATTCTTCCAT TATTAGAACA AGTTGTGCAG
GCTAGTCGAC CAATTTTAAT TGTTGCGGAT GAAGTAGAAG GCGATGCACT TACTAATATT
GTTTTAAACC GTATGCGTGG AACATTTACT GCTGTAGCAG TTAAAGCCCC AGGATTTGGT
GATCGACGTA AAGCAATGTT AGAAGACCTA GCAATATTAA CTGGTGCTCA AGTCATTACT
GATGATTTAG GTTTAGAACT TAAAGATGCA TCTCTTGATA TGCTAGGTAC TGCTAATAAA
GTTGAAGTGA CTAAAGATCA TACAACAGTC GTAGATGGTA ATGGTGATGA AAATAATATT
GATGCTCGTG TAGGTCAAAT TAAAGCACAA ATTGAAGAAA CTGATTCAGA GTTTGATAAA
GAAAAATTAC AGGAACGTTT GGCAAAACTA GCTGGCGGCG TAGCTGTTAT CAAAGTAGGG
GCTGCAAGTG AAACAGAGCT TAAAGAACGT AAATTAAGAA TTGAAGACGC ATTAAATTCA
ACACGTGCGG CGGTGGAAGA AGGTATCGTT GCTGGTGGTG GTACTGCGTT AGTCAATATA
TATCAAAAAG TAAGTGAAAT TAAAGCAGAA GGTGATGTTG AAACGGGTGT TAATATCGTA
TTAAAAGCAT TACAAGCACC TGTTAGACAA ATTGCTGAAA ATGCAGGATT AGAGGGTTCA
ATTATTGTTG AACGTTTAAA ACATGCTGAA GCGGGCGTTG GTTTCAATGC AGCAACAAAT
GAATGGGTTA ATATGTTAGA AGAAGGTATA GTAGATCCAA CTAAAGTAAC TCGTTCAGCG
TTACAACATG CAGCAAGTGT AGCTGCTATG TTCTTAACAA CTGAAGCAGT CGTTGCTAGT
ATTCCAGAGC CAGAAAATAA TGAACAACCT GGAATGGGTG GCATGCCAGG TATGATGTAA
 
Protein sequence
MAKDLKFSED ARQAMLRGVD KLANAVKVTI GPKGRNVVLD KDYTTPLITN DGVTIAKEIE 
LEDPYENMGA KLVQEVANKT NEIAGDGTTT ATVLAQSMIQ EGLKNVTSGA NPVGLRQGID
KAVQVAIEAL HEISQKVENK NEIAQVGAIS AADEEIGRYI SEAMDKVGND GVITIEESNG
FNTELEVVEG MQFDRGYQSP YMVTDSDKMI AELERPYILV TDKKISSFQD ILPLLEQVVQ
ASRPILIVAD EVEGDALTNI VLNRMRGTFT AVAVKAPGFG DRRKAMLEDL AILTGAQVIT
DDLGLELKDA SLDMLGTANK VEVTKDHTTV VDGNGDENNI DARVGQIKAQ IEETDSEFDK
EKLQERLAKL AGGVAVIKVG AASETELKER KLRIEDALNS TRAAVEEGIV AGGGTALVNI
YQKVSEIKAE GDVETGVNIV LKALQAPVRQ IAENAGLEGS IIVERLKHAE AGVGFNAATN
EWVNMLEEGI VDPTKVTRSA LQHAASVAAM FLTTEAVVAS IPEPENNEQP GMGGMPGMM