| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1484 |
|---|
| Symbol | groEL |
|---|
| ID | 3241942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1552090 |
|---|
| End bp | 1553709 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637168166 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_189050 |
|---|
| Protein GI | 57867363 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0241945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG ATCTTAAATT CTCTGAAGAT GCGCGTCAAG CAATGTTACG TGGTGTTGAT
AAATTAGCAA ACGCTGTAAA GGTTACAATT GGACCTAAAG GGCGAAATGT GGTTCTAGAT
AAGGATTACA CAACACCTTT AATTACCAAC GATGGTGTAA CAATTGCTAA GGAAATAGAG
TTAGAAGATC CATATGAGAA TATGGGTGCA AAATTAGTGC AGGAAGTTGC GAATAAAACA
AATGAAATCG CTGGGGACGG TACAACTACA GCAACAGTTT TAGCACAATC AATGATTCAG
GAAGGTCTTA AGAATGTTAC AAGTGGTGCA AATCCTGTAG GCTTAAGACA AGGTATTGAC
AAAGCAGTGC AAGTGGCTAT AGAAGCGCTT CATGAGATTT CTCAAAAGGT TGAAAATAAG
AACGAGATAG CGCAAGTTGG AGCTATTTCA GCAGCAGATG AAGAAATCGG TCGCTACATT
TCTGAAGCAA TGGATAAAGT AGGTAACGAT GGCGTTATCA CTATTGAAGA ATCAAATGGG
TTTAATACAG AATTAGAAGT AGTTGAAGGA ATGCAATTTG ATCGCGGTTA TCAATCACCA
TATATGGTAA CTGACTCAGA TAAAATGATA GCTGAATTAG AACGTCCATA TATATTAGTA
ACGGATAAGA AAATTTCATC ATTCCAAGAT ATTCTTCCAT TATTAGAACA AGTTGTGCAG
GCTAGTCGAC CAATTTTAAT TGTTGCGGAT GAAGTAGAAG GCGATGCACT TACTAATATT
GTTTTAAACC GTATGCGTGG AACATTTACT GCTGTAGCAG TTAAAGCCCC AGGATTTGGT
GATCGACGTA AAGCAATGTT AGAAGACCTA GCAATATTAA CTGGTGCTCA AGTCATTACT
GATGATTTAG GTTTAGAACT TAAAGATGCA TCTCTTGATA TGCTAGGTAC TGCTAATAAA
GTTGAAGTGA CTAAAGATCA TACAACAGTC GTAGATGGTA ATGGTGATGA AAATAATATT
GATGCTCGTG TAGGTCAAAT TAAAGCACAA ATTGAAGAAA CTGATTCAGA GTTTGATAAA
GAAAAATTAC AGGAACGTTT GGCAAAACTA GCTGGCGGCG TAGCTGTTAT CAAAGTAGGG
GCTGCAAGTG AAACAGAGCT TAAAGAACGT AAATTAAGAA TTGAAGACGC ATTAAATTCA
ACACGTGCGG CGGTGGAAGA AGGTATCGTT GCTGGTGGTG GTACTGCGTT AGTCAATATA
TATCAAAAAG TAAGTGAAAT TAAAGCAGAA GGTGATGTTG AAACGGGTGT TAATATCGTA
TTAAAAGCAT TACAAGCACC TGTTAGACAA ATTGCTGAAA ATGCAGGATT AGAGGGTTCA
ATTATTGTTG AACGTTTAAA ACATGCTGAA GCGGGCGTTG GTTTCAATGC AGCAACAAAT
GAATGGGTTA ATATGTTAGA AGAAGGTATA GTAGATCCAA CTAAAGTAAC TCGTTCAGCG
TTACAACATG CAGCAAGTGT AGCTGCTATG TTCTTAACAA CTGAAGCAGT CGTTGCTAGT
ATTCCAGAGC CAGAAAATAA TGAACAACCT GGAATGGGTG GCATGCCAGG TATGATGTAA
|
|---|
| Protein sequence | MAKDLKFSED ARQAMLRGVD KLANAVKVTI GPKGRNVVLD KDYTTPLITN DGVTIAKEIE
LEDPYENMGA KLVQEVANKT NEIAGDGTTT ATVLAQSMIQ EGLKNVTSGA NPVGLRQGID
KAVQVAIEAL HEISQKVENK NEIAQVGAIS AADEEIGRYI SEAMDKVGND GVITIEESNG
FNTELEVVEG MQFDRGYQSP YMVTDSDKMI AELERPYILV TDKKISSFQD ILPLLEQVVQ
ASRPILIVAD EVEGDALTNI VLNRMRGTFT AVAVKAPGFG DRRKAMLEDL AILTGAQVIT
DDLGLELKDA SLDMLGTANK VEVTKDHTTV VDGNGDENNI DARVGQIKAQ IEETDSEFDK
EKLQERLAKL AGGVAVIKVG AASETELKER KLRIEDALNS TRAAVEEGIV AGGGTALVNI
YQKVSEIKAE GDVETGVNIV LKALQAPVRQ IAENAGLEGS IIVERLKHAE AGVGFNAATN
EWVNMLEEGI VDPTKVTRSA LQHAASVAAM FLTTEAVVAS IPEPENNEQP GMGGMPGMM
|
|---|
| |