Gene SERP1482 details

Gene Information

• Locus tag: SERP1482
• ID: 3241932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1544501
• End bp: 1550422
• Gene Length: 5922 bp
• Protein Length: 1973 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637168164
• Product: cell wall surface anchor family protein
• Protein accession: YP_189048
• Protein GI: 57867352
• TIGRFAM ID: [TIGR01167] LPXTG-motif cell wall anchor domain

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGAAA ACAAAAGAAA AAACAACTTA GACAAGAACA ACACTCGTTT TTCTATTCGA 
AAATATCAAG GATACGGCGC AACTAGTGTA GCTATTATCG GCTTCATAAT CATTTCGTGT 
TTTAGTGAGG CAAAAGCAGA TAGTGACAAA CATGAAATAA AGTCTCATCA ACAATCAATG 
ACTAATCATT TAACCACTTT ACCGTCTGAT AATCAAGAGA ACACCTCAAA TAATGAATTC 
AATAACCGAA ATCATGATAT ATCTCATTTA AGTTTAAATA AGTCTATCCA GATGGACGAA 
CTTAAAAAGT TGATTAAGCA ATATAAAGCC ATTAATCTAA ATGACAAAAC TGAAGAATCA 
ATCAAATTGT TTCAATCTGA TTTAGTACAA GCGGAATCTC TAATTAACAA TCCTCAAAGT 
CAACAACATG TCGATGCGTT TTATCATAAA TTTTTAAACA GTGCTGGAAA GTTAAGGAAA 
AAAGAAACTG TATCAATCAA ACATGAACGA AGTGAGAGTA ACACATATCG TTTAGGTGAT 
GAAGTTAGAA GTCAAACTTT TTCTCATATT CGACATAAAA GAAATGCAGT TTCTTTTAGA 
AATGCGGATC AATCAAATTT GTCAACTGAC CCTTTAAAAG CAAATGAAAT CAATCCAGAA 
ATTCAAAACG GAAACTTTTC ACAAGTGTCT GGTGGGCCAT TGCCAACCAG TTCTAAGAGA 
TTGACAGTAG TTACAAATGT AGACAATTGG CATAGTTATT CTACCGATCC TAACCCTGAA 
TACCCAATGT TTTATACTAC AACTGCAGTT AACTACCCAA ATTTTATGAG TAACGGTAAT 
GCTCCTTATG GCGTAATTTT AGGAAGAACA ACAGATGGTT GGAATAGAAA TGTTATAGAC 
TCAAAAGTAG CAGGTATTTA TCAAGATATT GATGTGGTAC CTGGATCGGA ATTAAATGTT 
AATTTTATAT CTACTAGCCC TGTATTTTCT GATGGAGCTG CTGGTGCTAA GTTAAAAATC 
AGCAATGTAG AACAAAATCG TGTATTATTT GATAGTCGTC TAAACGGCAT GGGTCCGTAT 
CCCACTGGTA AGTTATCTGC AATGGTAAAT ATTCCGAATG ATATTAATAG AGTTCGAATC 
TCATTTTTAC CTGTATCTTC CACAGGTCGA GTTAGTGTAC AAAGATCTTC GAGAGAGCAT 
GGTTTTGGTG ATAATTCATC TTATTATCAT GGTGGTTCAG TAAGTGATGT AAGAATAAAT 
AGTGGATCTT ATGTGGTCTC TAAAGTGACA CAAAGAGAAT ATACAACTCG ACCTAATAGT 
TCGAACGATA CCTTTGCACG CGCAACAATT AATTTGTCTG TTGAAAACAA GGGCCATAAT 
CAATCAAAAG ATACATATTA TGAAGTTATT TTACCGCAAA ATTCAAGATT AATTTCGACT 
AGAGGAGGTA GTGGTAATTA TAATAATGCC ACAAATAAAC TTAGTATTCG ATTAGATAAC 
CTAAATCCTG GTGATAGAAG AGATATATCT TACACAGTTG ATTTTGAATC TTCAAGTCCC 
AAACTCATTA ATTTAAATGC GCATTTACTG TATAAAACCA ATGCTACATT TCGAGGAAAT 
GATGGACAAC GAACTGGTGA TAATATTGTT GATTTGCAAT CTATAGCACT ATTAATGAAT 
AAAGATGTGT TGGAAACTGA ATTGAATGAA ATTGATAAAT TTATACGTGA TTTAAATGAA 
GCTGACTTTA CGATAGATTC ATGGAGTGCA TTACAAGAAA AAATGACAGA AGGTGGAAAC 
ATTTTGAATG AGCAACAAAA TCAAGTTGCC CTTGAGAATC AAGCTTCTCA AGAAACTATC 
AATAATGTTA CTCAATCCTT AGAAATATTA AAAAACAACC TTAAATATAA AACACCATCT 
CAACCTATTA TTAAATCAAA TAATCAAATT CCCAATATAA CTATATCTCC AGCGGACAAA 
GCAGATAAGC TAACAATCAC TTATCAAAAT ACTGATAATG AGAGTGCTTC AATTATAGGA 
AATAAATTGA ATAATCAATG GTCTCTTAAC AACAATATTC CGGGTATAGA AATTGATATG 
CAAACAGGTT TGGTAACAAT TGATTACAAG GCAGTTTATC CTGAAAGTGT TGTAGGGGCT 
AATGATAAAA CTGGAAACAG TGATGCAAGT GCTGAGAGTC GTATCACTAT GCCAAGAAAA 
GAAGCAACAC CACTTTCACC AATTGTTGAA GCAAATGAAG AGAGAGTAAA TGTAGTAATC 
GCACCTAATG GTGAAGCAAC CCAAATAGCT ATTAAGTATA GAACTCCAGA TGGACAAGAA 
GCAACACTCG TTGCAAGTAA GAACGGATCA TCATGGACAT TAAACAAGCA AATAGATTAT 
GTAAATATAG AAGAAAATAG TGGGAAAGTA ACGATTGGCT ATCAAGCAGT TCAACCAGAG 
AGTGAAGTCA TCGCAACAGA GACAAAAGGA AACAGTGATG AAAGTGCTGA GAGCCGTGTC 
ACTATGCCGA GGAAAGAAGC AACACCACAT TCACCAATTG TTGAAGCAAA TGAAGAACAC 
GTGAATGTAA CCATCGCACC TAATGGTGAA GCAACTCAAA TAGCTATTAA GTATAGAACT 
CCAGATGGAC AAGAAACAAC ACTCATTGCA AGTAAGAACG GATCATCATG GACATTAAAC 
AAGCAAATAG ATTATGTAAA TATAGAAGAA AATAGTGGGA AAGTAACGAT TGGCTATCAA 
GCAGTTCAAC TAGAAAGTGA AGTCATCGCA ACAGAGACAA AAGGAAATAG TGATGCAAGT 
GCTGAGAGCC GTATCACTAT GCTGAGGAAA GAAGCAACAC CACATTCACC AATTGTTGAA 
GCAAATGAAG AGCACGTGAA TGTAACCATC GCACCTAATG GTGAAGCAAC CCAAATAGCT 
ATTAAGTATA GAACTCCAGA CGGACAAGAA GCAACACTCG TTGCAAGTAA GAATGAATCA 
TCATGGACAT TAAACAAGCA AATAGATCAT GTAAATATAG ATGAAAATAG TGGGAAAGTA 
ACGATTGGCT ATCAAGCAGT TCAACCAGAA AGTGAAATTA TCGCAACAGA GACAAAAGGA 
AACAGTGATG CAAGTGCTGA GAGTCGTATC ACTATGCCGA GGAAAGAAGC AACACCTATA 
CCTCCAACGT TAGAAGCTAG CGTACAAGAA GCAAGTGTTA CAGTAACGCC TAATGAAAAT 
GCTACAAAAG TATTTATTAA ATATTTAGAT ATTAATGATG AAATAAGTAC TATTATAGCA 
AGTAAAATAA ATCAACAGTG GACGTTAAAT AAAGATAATT TTGGTATAAA AATTAATCCA 
TTGACTGGAA AAGTCATTAT TAGTTATGTA GCAGTTCAAC CAGAAAGCGA TGTTATAGCA 
ATAGAATCAC AAGGTAATAG TGATTTAAGT GAAGAAAGTC GAATAATAAT GCCAACTAAA 
GAAGAACCTC CTGAACCTCC TATATTAGAA TCTGATTCTA TTGAAGCTAA AGTAAATATA 
TTTCCTAATG ATGAAGCTAC GAGGATAGTA ATCATGTATA CGAGTTTAGA AGGACAAGAA 
GCAACACTCG TTGCAAGTAA GAATGAATCA TCATGGACAT TAAACAAGCA AATAGATCAT 
GTAAATATAG ATGAAAATAG TGGGAAAGTA ACGATTGGCT ATCAAGCAGT TCAACCAGAA 
AGTGAAGTCA TCGCAACAGA GACAAAAGGA AACAGTGATG CAAGTGCTGA GAGCCGTGTC 
ACTATGCCGA GAAAAGAAGC AACACCACAT TCACCAATTG TTGAAACAAA TGAAGAGAGA 
GTAAATGTAG TAATCGCACC TAATGGTGAA GCAACCCAAA TAGCTATTAA GTATAGAACT 
CCAGATGGAC AAGAAACAAC ACTCATTGCA AGTAAGAACG GATCATCATG GACATTAAAC 
AAGCAAATAG ATCATGTAAA TATAGATGAA AATAGTGGGA AAGTAACGAT TGGCTATCAA 
GCAGTTCAAC CAGAAAGTGA AATTATCGCA ACAGAGACAA AAGGAAACAG TGATGCAAGT 
GCTGAGAGTC GTATCACTAT GCCAAGAAAA GAAGCAATAC CACATTCACC AATTGTTGAA 
GCAAATGAAG AACACGTGAA TGTAACCATC GCACCTAATG GAGAGACAAC TCAAATAGCT 
GTTAAGTATA GAACTCCAGA TGGACAAGAA GCAACACTCA TTGCAAGTAA AAATGAATCA 
TCATGGACAT TAAACAAGCA AATAGATCAT GTAAATATAG ATGAAAATAG TGGGAAAGTA 
ACGATTGGCT ATCAAGCAGT TCAACCAGAG AGTGAAGTCA TCGCAACAGA GACAAAAGGA 
AACAGTGATG CAAGTGCTGA GAGTCGTATC ACTATGCCAG TTAAAGAAAA GACGCCAGCT 
CCCCCTATAT CTATAATCAA CGAATCTAAT GCAAGTGTTG AGATAATACC TCAAGTTAAT 
GTTACTCAGT TATCGTTACA ATATATAGAC GCTAAGGGAC AACAACAAAA TTTAATTGCT 
ACATTAAATC AAAATCAATG GACATTAAAT AAAAACGTCT CTCATATTAC TGTAGATAAA 
AATACAGGAA AAGTATTGAT TAATTATCAA GCGGTGTACC CTGAAAGTGA AGTGATTGCA 
AGAGAAAGCA AAGGTAATAG CGACTCAAGC AATGTAAGTA TGGTTATCAT GCCAAGAAAA 
ACAGCTACAC CAAAACCGCC TATTATAAAA GTAGATGAAA TGAATGCAAG TTTAGCTATC 
ATTCCTTACA AAAATAATAC AGCTATTAAT ATACATTACA TAGATAAAAA AGGCATTAAG 
TCTATGGTTA CTGCAATCAA AAACAACGAT CAATGGCAAT TGGACGAAAA AATTAAGTAT 
GTAAAAATCG ATGCAAAAAC CGGTACAGTT ATCATTAATT ATCAAATTGT ACAAGAGAAT 
AGTGAAATAA TTGCTACAGC TATCAATGGT AATAGTGATA AGAGTGAAGA GGTTAAAGTA 
TTAATGCCTA TTAAAGAGTT TACACCACTT GCACCTTTAT TAGAGACTAA CTATAAAAAA 
GCGACAGTTT CTATATTACC TCAATCGAAT GCTACAAAAC TGGATTTTAA ATACCGAGAT 
AAAAAGGGAG ATTCAAAAAT AATTATAGTT AAAAGATTTA AAAATATATG GAAAGCAAAC 
GAGCAAATCA GTGGTGTGAC TATAAATCCA GAATTTGGAC AAGTAGTTAT CAACTATCAA 
GCAGTATATC CAGAAAGTGA TATACTAGCA GCACAGTACG TAGGAAATAG TGATGCTAGT 
GAATGGGCTA AAGTTAAAAT GCCTAAAAAG GAATTAGCAC CGCATTCACC ATCATTAATC 
TATGATAATA GAAATAATAA GATATTGATT GCACCTAATA GTAATGCCAC TGAAATGGAA 
TTATCGTATG TGGATAAAAA TAATCAATCA TTGAAGGTTA AAGCACTCAA AATTAATAAT 
AGATGGAAGT TTGATTCAAG TGTTAGTAAT ATATCTATCA ATCCAAACAC AGGAAAAATA 
GTATTACAGC CACAATTCTT ATTAACTAAC AGTAAGATTA TTGTCTTTGC TAAAAAAGGA 
AACAGTGATG CAAGTATATC AGTTTCTTTA AGGGTGCCAG CAGTTAAAAA AATAGAATTA 
GAACCTATGT TTAATGTGCC CGTGTTGGTA TCATTAAATA AAAAGCGTAT TCAATTTGAT 
GATTGTAGTG GTGTGAAAAA TTGTTTAAAT AAACAAATAT CGAAAACTCA ACTTCCTGAT 
ACTGGATATA GTGATAAGGC ATCAAAGTCG AACATATTAA GTGTACTTTT ACTAGGTTTT 
GGCTTTTTAT CTTATTCACG AAAAAGAAAA GAGAAGCAGT AA 

 

Protein sequence

MKENKRKNNL DKNNTRFSIR KYQGYGATSV AIIGFIIISC FSEAKADSDK HEIKSHQQSM 
TNHLTTLPSD NQENTSNNEF NNRNHDISHL SLNKSIQMDE LKKLIKQYKA INLNDKTEES 
IKLFQSDLVQ AESLINNPQS QQHVDAFYHK FLNSAGKLRK KETVSIKHER SESNTYRLGD 
EVRSQTFSHI RHKRNAVSFR NADQSNLSTD PLKANEINPE IQNGNFSQVS GGPLPTSSKR 
LTVVTNVDNW HSYSTDPNPE YPMFYTTTAV NYPNFMSNGN APYGVILGRT TDGWNRNVID 
SKVAGIYQDI DVVPGSELNV NFISTSPVFS DGAAGAKLKI SNVEQNRVLF DSRLNGMGPY 
PTGKLSAMVN IPNDINRVRI SFLPVSSTGR VSVQRSSREH GFGDNSSYYH GGSVSDVRIN 
SGSYVVSKVT QREYTTRPNS SNDTFARATI NLSVENKGHN QSKDTYYEVI LPQNSRLIST 
RGGSGNYNNA TNKLSIRLDN LNPGDRRDIS YTVDFESSSP KLINLNAHLL YKTNATFRGN 
DGQRTGDNIV DLQSIALLMN KDVLETELNE IDKFIRDLNE ADFTIDSWSA LQEKMTEGGN 
ILNEQQNQVA LENQASQETI NNVTQSLEIL KNNLKYKTPS QPIIKSNNQI PNITISPADK 
ADKLTITYQN TDNESASIIG NKLNNQWSLN NNIPGIEIDM QTGLVTIDYK AVYPESVVGA 
NDKTGNSDAS AESRITMPRK EATPLSPIVE ANEERVNVVI APNGEATQIA IKYRTPDGQE 
ATLVASKNGS SWTLNKQIDY VNIEENSGKV TIGYQAVQPE SEVIATETKG NSDESAESRV 
TMPRKEATPH SPIVEANEEH VNVTIAPNGE ATQIAIKYRT PDGQETTLIA SKNGSSWTLN 
KQIDYVNIEE NSGKVTIGYQ AVQLESEVIA TETKGNSDAS AESRITMLRK EATPHSPIVE 
ANEEHVNVTI APNGEATQIA IKYRTPDGQE ATLVASKNES SWTLNKQIDH VNIDENSGKV 
TIGYQAVQPE SEIIATETKG NSDASAESRI TMPRKEATPI PPTLEASVQE ASVTVTPNEN 
ATKVFIKYLD INDEISTIIA SKINQQWTLN KDNFGIKINP LTGKVIISYV AVQPESDVIA 
IESQGNSDLS EESRIIMPTK EEPPEPPILE SDSIEAKVNI FPNDEATRIV IMYTSLEGQE 
ATLVASKNES SWTLNKQIDH VNIDENSGKV TIGYQAVQPE SEVIATETKG NSDASAESRV 
TMPRKEATPH SPIVETNEER VNVVIAPNGE ATQIAIKYRT PDGQETTLIA SKNGSSWTLN 
KQIDHVNIDE NSGKVTIGYQ AVQPESEIIA TETKGNSDAS AESRITMPRK EAIPHSPIVE 
ANEEHVNVTI APNGETTQIA VKYRTPDGQE ATLIASKNES SWTLNKQIDH VNIDENSGKV 
TIGYQAVQPE SEVIATETKG NSDASAESRI TMPVKEKTPA PPISIINESN ASVEIIPQVN 
VTQLSLQYID AKGQQQNLIA TLNQNQWTLN KNVSHITVDK NTGKVLINYQ AVYPESEVIA 
RESKGNSDSS NVSMVIMPRK TATPKPPIIK VDEMNASLAI IPYKNNTAIN IHYIDKKGIK 
SMVTAIKNND QWQLDEKIKY VKIDAKTGTV IINYQIVQEN SEIIATAING NSDKSEEVKV 
LMPIKEFTPL APLLETNYKK ATVSILPQSN ATKLDFKYRD KKGDSKIIIV KRFKNIWKAN 
EQISGVTINP EFGQVVINYQ AVYPESDILA AQYVGNSDAS EWAKVKMPKK ELAPHSPSLI 
YDNRNNKILI APNSNATEME LSYVDKNNQS LKVKALKINN RWKFDSSVSN ISINPNTGKI 
VLQPQFLLTN SKIIVFAKKG NSDASISVSL RVPAVKKIEL EPMFNVPVLV SLNKKRIQFD 
DCSGVKNCLN KQISKTQLPD TGYSDKASKS NILSVLLLGF GFLSYSRKRK EKQ