Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1475 |
Symbol | |
ID | 3241925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1539261 |
End bp | 1540136 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637168157 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_189041 |
Protein GI | 57867345 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000651776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAT TACAACATAT TACCAAAAAA TATGGTCAAA ATACTGTTTT AGACGATATA GATTTTGATT TCGGCGAGAG TCAAATCGTT GGTCTTATCG GTAAAAATGG AGTTGGTAAA ACAACTTTGA TGAAGGTCAT GAATAATAAC ATCATTAACT ATCAAGGGAA AGTCGACATG CCTAAAAGTG AGAATGTTGG TTATTTAATT GAGCATCCTA AGTTATATGG AAACAAGACA GGTTTATTTA ATTTAAAATT ATTTGCACAA GTATTAGGCG ATGGTTTCGA TAAGGAATAT GCAAATCATA TTATTGAAGC TTTTGGAATG AAACCATATA TCAAGAAAAA AGTTAACAAA TATTCAATGG GAATGAAACA AAAATTATCA ATTGCAGTTT CATTAATGAA TAAACCTAAA TACTTAATTT TAGATGAACC TACAAATGGT ATGGATCCAG ATGGTTCGAT AGATGTATTA AAGACAATTC AATCACTTGT TCAACAATTA GAAATGAAAA TATTAATCTC AAGTCATAAA TTAGAAGACA TTGAATTGAT TTGTGATAGA GCAGTATTTC TTAGAGATGG TAAGTTCGTT CAAGATGTAG ATATGAAAGA TGGGGGACCA GAGGATAGTA CTATTCTTAC TTTACAAAAA GATGACTTTA ATAAAGCTTT AGATTCTCTT TCTGAAAACT TTAAAGTACA GCAGTCTCAA AAAGAATCGG GAGAAATTAT CATTAAAGCT CAAAATGATT ATAGAGAGTT ACTTAAATCG TTATCCCAAC TAGATATTTA TCCAAAATAT ATTGAAACAC GTAAAAGTTC ACTACGTGAT ACTTACTTTA ATATTAATCA AAGAGGTGAT AAATAA
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Protein sequence | MMKLQHITKK YGQNTVLDDI DFDFGESQIV GLIGKNGVGK TTLMKVMNNN IINYQGKVDM PKSENVGYLI EHPKLYGNKT GLFNLKLFAQ VLGDGFDKEY ANHIIEAFGM KPYIKKKVNK YSMGMKQKLS IAVSLMNKPK YLILDEPTNG MDPDGSIDVL KTIQSLVQQL EMKILISSHK LEDIELICDR AVFLRDGKFV QDVDMKDGGP EDSTILTLQK DDFNKALDSL SENFKVQQSQ KESGEIIIKA QNDYRELLKS LSQLDIYPKY IETRKSSLRD TYFNINQRGD K
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