| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1469 |
|---|
| Symbol | |
|---|
| ID | 3241911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 1534718 |
|---|
| End bp | 1535758 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637168152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_189036 |
|---|
| Protein GI | 57867332 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4927] Predicted choloylglycine hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000286435 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAG TACGTTCTGA TATAATGACT CATCGTGGTT CTCACTATGA TTTAGGAGTA
AAGACTGCTC TTTGGTTACA AACCACTCCT TTATTAAAAA ATCGAAATAA AGAATGGCGA
AAGAGAATTC CACGTTTTGA TATTGATGTC AAGGAAACCT ATGATATATT TCAAATCTAT
TCGCCACAGA TTTGGGAAGA AATAATTGGT ATGCAAGATG TATTGAATCT ACCTACAAAA
CAAATGATTT TAAATTTTGG CCATTATCGA TTTACTGATT TAAAGGACAG TGGTTGCACA
GTATATAAAG GTCGTGATTT TTTAGTCCGA AATTATGATT ATCATCCTGC AACATATGAT
GGTAGATACT TATTATTTCA ACCTAATGAC GGGGGATTAT CTCAAATAGG ACCGACTTCA
AGAGTGACTG GTAGAATGGA TGGTATGAAC GAGTATGGTT TAGTTATGGC ATATAATTTT
ATGCATCGTA AAAAGCCTGC AAATGGATTT GTATGTTACA TGGTTGGTCG GCTAATACTT
GAAAATTGCA AAAATGTAAC TGAAGCAATC AAATTTTTAA AGGAAGTACC GCATCGTAGT
TCATTCAGTT ATATACTAAT GGATAGACAT TCGAATTATG CCATTGTCGA AGTTACACCT
CGATCAATAG ATGTAAGGTA TGAACATATA TGCACAAATC ATTTTGAATT GCTTACCCAT
GAAAATAGAA ACTATACAAG AGAATCTAAA GAACGCTTAA ATCGTGTAAT AAATAAAACA
ACTCCTTCTA CAAACAAAGA TATCGCATTC AAATTATTTA ACGACCCGCA ATACGAAATC
TATAGCAACC TATTTAAAAG TTGGTCTGGT ACAATTCATA CTTCACTATA TGAACCTAAT
TCATTAATAG CATGGATGGC ATTAGGTCAA AACAGTCATC CAACCTCAAT CAATTTTTCT
AATTGGTTAA AAGGAAAGAA ATTGAATATA AATTACTTTG AAGGCGAAAT AGATACACCA
TTAACTTTTG CCACATACTA A
|
|---|
| Protein sequence | MQKVRSDIMT HRGSHYDLGV KTALWLQTTP LLKNRNKEWR KRIPRFDIDV KETYDIFQIY
SPQIWEEIIG MQDVLNLPTK QMILNFGHYR FTDLKDSGCT VYKGRDFLVR NYDYHPATYD
GRYLLFQPND GGLSQIGPTS RVTGRMDGMN EYGLVMAYNF MHRKKPANGF VCYMVGRLIL
ENCKNVTEAI KFLKEVPHRS SFSYILMDRH SNYAIVEVTP RSIDVRYEHI CTNHFELLTH
ENRNYTRESK ERLNRVINKT TPSTNKDIAF KLFNDPQYEI YSNLFKSWSG TIHTSLYEPN
SLIAWMALGQ NSHPTSINFS NWLKGKKLNI NYFEGEIDTP LTFATY
|
|---|
| |