Gene SERP1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1466 
Symbol 
ID3241224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1532356 
End bp1533468 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content26% 
IMG OID637168150 
ProductTn554-related, transposase A 
Protein accessionYP_189034 
Protein GI57867419 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0000354684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG TAGAAGTAAA ATCTAAGAAT GGTACCAATT TTATGATTTT AGATGGTAAT 
AATGAACCTA TAGTAGATGC AGTAAGATAT TTGAAGTATC TGGATAGTGT TAAGAAAAGT 
TTAAATACCA AGAAAACCTA TGCCTATGCA CTAAAAAATT TTTTTGTTTA CTTAGAAAGT 
AAAAAGATAT GCTATAAAGA AGTTAGTTTT GATAACTTTG TTGATTTTAT AAGATGGATG 
AAAACACCTT TTGAATATGA GAATGTCCTC TCTTATCACC GAAAAGAAAA AAGCATTAGT 
CCTAAGACAA TTAATCTGAC TATGACTGTA GTATCTAATT TTTATGATTA TCTCTATAGG 
AGTAAAAAAT TAGATGTTAA TTTCTATGAT TTTATGCATA TGGAAAGTAA ATACTCTAAA 
AAATATAAAA GTTTCATGCA TCACATAAAT AAGGACTATA GAACGTTGAA AAATATTTTG 
AAAGTTAAAG AACCAAAGAA AAAAATAGAA GTGTTAACTA ATGCGGAGGT TAAGAAATTA 
TTAGAGGAAG CTAATAATAT TAGAGATAAA TTCTTAATAC AATTACTATA TGAAACCGGA 
TTACGTATAG GTGAGGTATT ATCATTACGT ATTGATGATA TTAAATTTGA CTTTAGAAAA 
GGCCATCAAA TAGTTTTGAA AAATAGATTT AATGATAATG GTACTTATTT GAAAACTGGG 
GAAAGAAAAA TATTTATTTC CCAATCGTTA ATTGATTTAT ACGATGATTA TGTCTACGAA 
ATAATTGACG AACTTTCAAT ATGTTCTGAT TATCTTTTTG TAAAAATAAA GGGGAGAAAT 
GTAGGAGAAG CTATGAATTA TAGTGATATA TATTCATTAT TTAAAAGGCT AAAACATAAA 
ACATCTATAA ATGTTCATCC TCATTTATTT CGCCATACAC ATGCAACTGT TTTTTATAAT 
GAAACTAAGG ATATAAAACA AGTTCAAGAA AGACTTGGTC ATAGTAATAT ACAAACGACT 
ATTAATTTAT ATGTTCATCC CACTGAAGAA GATATACGTG AAGATTGGAA TAAAGTAAAG 
CATCAATTTC AAGTTTTTAA TAAAGGGGAA TGA
 
Protein sequence
MKIVEVKSKN GTNFMILDGN NEPIVDAVRY LKYLDSVKKS LNTKKTYAYA LKNFFVYLES 
KKICYKEVSF DNFVDFIRWM KTPFEYENVL SYHRKEKSIS PKTINLTMTV VSNFYDYLYR 
SKKLDVNFYD FMHMESKYSK KYKSFMHHIN KDYRTLKNIL KVKEPKKKIE VLTNAEVKKL 
LEEANNIRDK FLIQLLYETG LRIGEVLSLR IDDIKFDFRK GHQIVLKNRF NDNGTYLKTG 
ERKIFISQSL IDLYDDYVYE IIDELSICSD YLFVKIKGRN VGEAMNYSDI YSLFKRLKHK 
TSINVHPHLF RHTHATVFYN ETKDIKQVQE RLGHSNIQTT INLYVHPTEE DIREDWNKVK 
HQFQVFNKGE