| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1465 |
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| Symbol | |
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| ID | 3241223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1530290 |
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| End bp | 1532317 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637168149 |
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| Product | Tn554-related, transposase B |
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| Protein accession | YP_189033 |
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| Protein GI | 57867418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000329851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATG AATTATGTAC ATTACAAAGT AGAACCATCA ATATAAAAGG AGAGGTTTTA
ATAACTGAAA TATATGATGA TTACTTTTTT AAAAATGATG AGTGGCACAT TACAGCTTTT
AACAAATTCA AGCAATTTCA AGATAGTATC AAGAACTATA GAGACAAAAG AAAAAATGTT
TTCTTTAGGA TTAAAAGTAA AAATTTGAAT TTAGAATTTA AATACCTTTT TTTGAAACTG
ATAGTTAAAG AGGATTGGTC CTTATCTAAT TTATTTAATA CTGGAGCAGT AAAGCTTAAT
AAGATTGCTA AGTTCTTTAA TGAAGTTTAT CCAAATTTAA ATTCTTTACT TGATTGTGAT
ATAAATACAT TAGAAAAGCA CTGGTTTAAT TGGCTGACTG AAAATAATAT ACCAATAAAA
AGAAGATCAT CAACAATAGT TTTTGGTGAT TATGAATACA AAAGCGGACT GGCTTCTTTT
TTAAAGAATA TGTACATTAA TCTAATTAAG TTCATTGATA AGCGAGAAGA ATGGGAAAAA
GATAAATGGG ATATTAGAAA TTTAGAAAAA TATGGATTGA GTTATAATAA AACACTAACT
GGCAATTATT TAAACTTTGA AAAAATTGAG TCAATTAAAA TGCGAGAATT AGCAAAAAAA
TATTTAAAAA ATCGTTTGAT AACTGGTGAT ATAGCATTTG CTACAGCAAG GTTTTATATA
AGAGTTTTAA CTAGGTTTTT TCAAAATATA TCTAAAAATA AAGAAACAAG GAATAGTTTA
AATGAACTAG ATAGATGTCA TATCGAAGCA TATATAGAAT TTTTGTTTGA ATATGCAGCT
AATAAACATT TGCAAAGTAC TAAGAATTTT GTGAGAGAAG AATTAAAAAC AATTAGAAGG
TTCTTAAACG ATATTATAAC TCAAAACTAT GCTATAGCAC CGTACCAAGA TATACGATTT
TTAATTTATC CTCAAGACTT ACCTAAACAC GAAAAGAAAA ATAGTAGCCA AATTGATTAT
ATCCCAGATT TTGTATTGGA ACAGCTTTTT GAGCATATAA ATGATTTGCA TAAAGATTTA
ATACCTGTAG TTTGGATAGC TTTTAAAACA GGATTAAGAA TTTCTGATGT ATTGACATTA
CAAAATAATT GCCTTGCAAA AGTTAATGGA AAGTATTCAA TAATCACAGA TATTGCTAAA
ACTTTTGTTA AAGGACATAG AATACCAATT GATAATAAAT TAGCTGATAT AATAGCAGTT
TTAATAGCCG ATTCTAAAAG TAAAAGTACA AAAGATAATA ATCCTAATAA TTATATTTTT
GCTATTTATA AAGGAAAAAG AAAGGGAATG CCCTTTACAC AACATATGGT CAGAGCACAC
TTAAATCATT TATCAAAGAC TAAAAATATT ATTGATGAAC AAGGAGAAAT CTTCCATTTC
AAAACTCATC AATTTAGACA TACCTATGCA GTAAAATTGT TAAATGGTGG AGCAGATATA
TTAACGATAC AAGAATTATT AGCACACTCC TCACCAGAAA TGACTCTAAG ATATGCTAAG
TTACTTGATG ATACAAAGAG AAAGGCTTTT GAATCAGTTA TTGATCAAGG AGCTTTTAGT
TTTGATGTTG ACGGTAAAAT TAAAAATATA CAGCATAGTA GTGAACTATC TGAAAAAGCA
TTGAATTCTT TATGGCAAGA ACATAAATTA AACGCAATGG ACAATCCTTA TGGCACTTGT
CATGCTAGAT TGAGTGGTGA TTGTCCATAC ATGGAAGCTC CGCCATGCCT GACTTGTAAT
TCTGGGAAAC CATGTAAGGA TTTAGCTATT GGATTTTCTG ATTTAGATGT TGAAAAATAT
GAATTACATA TCAAATCAAC GGTCAAATCT ATAGAATTAG CTAAAAATAA TAATAGACAA
GATATGGTTG AAAAGCATAT AAATATATTA AATAAATATG AAGAAATACT AGGTAATATA
AAAGATGGAA ACATTATATT CGGGAGAAGT AATAGAATAA AAGTATAG
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| Protein sequence | MINELCTLQS RTINIKGEVL ITEIYDDYFF KNDEWHITAF NKFKQFQDSI KNYRDKRKNV
FFRIKSKNLN LEFKYLFLKL IVKEDWSLSN LFNTGAVKLN KIAKFFNEVY PNLNSLLDCD
INTLEKHWFN WLTENNIPIK RRSSTIVFGD YEYKSGLASF LKNMYINLIK FIDKREEWEK
DKWDIRNLEK YGLSYNKTLT GNYLNFEKIE SIKMRELAKK YLKNRLITGD IAFATARFYI
RVLTRFFQNI SKNKETRNSL NELDRCHIEA YIEFLFEYAA NKHLQSTKNF VREELKTIRR
FLNDIITQNY AIAPYQDIRF LIYPQDLPKH EKKNSSQIDY IPDFVLEQLF EHINDLHKDL
IPVVWIAFKT GLRISDVLTL QNNCLAKVNG KYSIITDIAK TFVKGHRIPI DNKLADIIAV
LIADSKSKST KDNNPNNYIF AIYKGKRKGM PFTQHMVRAH LNHLSKTKNI IDEQGEIFHF
KTHQFRHTYA VKLLNGGADI LTIQELLAHS SPEMTLRYAK LLDDTKRKAF ESVIDQGAFS
FDVDGKIKNI QHSSELSEKA LNSLWQEHKL NAMDNPYGTC HARLSGDCPY MEAPPCLTCN
SGKPCKDLAI GFSDLDVEKY ELHIKSTVKS IELAKNNNRQ DMVEKHINIL NKYEEILGNI
KDGNIIFGRS NRIKV
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