Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1461 |
Symbol | blaZ-1 |
ID | 3241219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1526929 |
End bp | 1527774 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 637168146 |
Product | beta-lactamase |
Protein accession | YP_189030 |
Protein GI | 57867415 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000606935 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAGT TAATACTTTT AATTGCAATT GCTTTAGTTT TAAGTGCATG TAATTCAACC AGTTCACATG CTAAAGAGTT AAATAATTTA GAAAAGAAAT ATAATGCTAA TATTGGTGTC TATGCATTAG ATACTAAAAG TGGTAAGGAA GTAAAATTTA ATGCCGATAA GAGATTTGCC TATGCTTCAA CTTCAAAAGC GATAAATAGT GCTATTTTGT TAGAACAAGT ACCTTATAAT AAGTTAAATA AAAAAGTACA TATTAACAAA GATGATATAG TTGCTTATTC TCCTATTTTA GAAAAATATG TAGGAAAAGA TATCACTTTA AAAGAACTTA TTGAGGCTTC AATGAAGTAT AGTGATAATA CAGCAAACAA TAAAATTATA AACGAAATCG GTGGAATCAA AAAAATTAAA AAACGTTTAA AAAAATTGGG AGATAAAGTA ACAAATCCAG TTAGATATGA AATAGAATTA AATTACTATT CACCAAAGAG CAAAAAAGAT ACTTCAACGC CTGCTGCTTT CGGCAAGACT TTAAATAAAC TTATCGCAAA TGGAAAATTA AGCAAAAAAA ATAAAAATTT CTTACTTGAT TTAATGTTAA ATAATAAAAA CGGAGACACT TTAATTAAAG ATGGTGTTCC AAAAGACTAT AAGGTTGCTG ATAAAAGTGG TCAAGCAATA ACATATGCTT CTAGAAATGA TGTAGCTTTT GTTTATCCTA AGAACCAATC TGAACCTATT ATTTTAGTCA TTTTTACGAA TAAAGACAAT AAAAGTGATA AACCTAATGA TAAATTGATA AGTGAAACCG CCAAGAATGT AATAAACAAA TTTTAA
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Protein sequence | MKKLILLIAI ALVLSACNST SSHAKELNNL EKKYNANIGV YALDTKSGKE VKFNADKRFA YASTSKAINS AILLEQVPYN KLNKKVHINK DDIVAYSPIL EKYVGKDITL KELIEASMKY SDNTANNKII NEIGGIKKIK KRLKKLGDKV TNPVRYEIEL NYYSPKSKKD TSTPAAFGKT LNKLIANGKL SKKNKNFLLD LMLNNKNGDT LIKDGVPKDY KVADKSGQAI TYASRNDVAF VYPKNQSEPI ILVIFTNKDN KSDKPNDKLI SETAKNVINK F
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