Gene SERP1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1461 
SymbolblaZ-1 
ID3241219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1526929 
End bp1527774 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content26% 
IMG OID637168146 
Productbeta-lactamase 
Protein accessionYP_189030 
Protein GI57867415 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000606935 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAGT TAATACTTTT AATTGCAATT GCTTTAGTTT TAAGTGCATG TAATTCAACC 
AGTTCACATG CTAAAGAGTT AAATAATTTA GAAAAGAAAT ATAATGCTAA TATTGGTGTC
TATGCATTAG ATACTAAAAG TGGTAAGGAA GTAAAATTTA ATGCCGATAA GAGATTTGCC
TATGCTTCAA CTTCAAAAGC GATAAATAGT GCTATTTTGT TAGAACAAGT ACCTTATAAT
AAGTTAAATA AAAAAGTACA TATTAACAAA GATGATATAG TTGCTTATTC TCCTATTTTA
GAAAAATATG TAGGAAAAGA TATCACTTTA AAAGAACTTA TTGAGGCTTC AATGAAGTAT
AGTGATAATA CAGCAAACAA TAAAATTATA AACGAAATCG GTGGAATCAA AAAAATTAAA
AAACGTTTAA AAAAATTGGG AGATAAAGTA ACAAATCCAG TTAGATATGA AATAGAATTA
AATTACTATT CACCAAAGAG CAAAAAAGAT ACTTCAACGC CTGCTGCTTT CGGCAAGACT
TTAAATAAAC TTATCGCAAA TGGAAAATTA AGCAAAAAAA ATAAAAATTT CTTACTTGAT
TTAATGTTAA ATAATAAAAA CGGAGACACT TTAATTAAAG ATGGTGTTCC AAAAGACTAT
AAGGTTGCTG ATAAAAGTGG TCAAGCAATA ACATATGCTT CTAGAAATGA TGTAGCTTTT
GTTTATCCTA AGAACCAATC TGAACCTATT ATTTTAGTCA TTTTTACGAA TAAAGACAAT
AAAAGTGATA AACCTAATGA TAAATTGATA AGTGAAACCG CCAAGAATGT AATAAACAAA
TTTTAA
 
Protein sequence
MKKLILLIAI ALVLSACNST SSHAKELNNL EKKYNANIGV YALDTKSGKE VKFNADKRFA 
YASTSKAINS AILLEQVPYN KLNKKVHINK DDIVAYSPIL EKYVGKDITL KELIEASMKY
SDNTANNKII NEIGGIKKIK KRLKKLGDKV TNPVRYEIEL NYYSPKSKKD TSTPAAFGKT
LNKLIANGKL SKKNKNFLLD LMLNNKNGDT LIKDGVPKDY KVADKSGQAI TYASRNDVAF
VYPKNQSEPI ILVIFTNKDN KSDKPNDKLI SETAKNVINK F