| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1457 |
|---|
| Symbol | |
|---|
| ID | 3241211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1523242 |
|---|
| End bp | 1524270 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637168142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_189026 |
|---|
| Protein GI | 57867407 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2706] 3-carboxymuconate cyclase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0718826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAG GTTATATAGG TTCTTATACT AAAAAGAGTG GTAAAGGTAT ATATCGCTTC
AAACTAAATG ACGAAACAGG AGTTATTGAA GCGTTAGAAA CTGGTTATGA AATTGAAGCG
TCAACTTATC TTACTCGTAA TGAATCGTTT TTATATGCGA TTACTAAAGA AGGTGAAGAA
TGTGGTGTAG CTAGTTTTAG TATTAAAGAA GATGGACAAC TGGAATTAAT TAATAAATGT
CTAGAATCAA AACAGGGAAC TGGTTGTTAC ATTCAAGTGT CTAGTAATGG TAAATATTTA
TTTGAAGCGG TTTATGGTGC AGGACTTGCA AGGATTTATA AATTAAATCA AATTACGGGA
GCAATAGAGA AATTAATAGA AGAACTTGCG CATGAATTTC CAACTGGCTC ACATGAAAGA
CAAGATTCAT CACATGTTCA TTTTTTAAAT GAAACACCTG ATCATAAGTA TGTTGTAGCT
ACTGATTTAG GTACAGATAG AGTTGTAACA TACAAATTTG GTGAGGATGG TTTAAAACAA
TATGCAGTTT CTCAATTCAA AAATTCAGAC GGGCCTCGCC ACATCGCTTT TAGTAATGAT
GGACGACACG CGTATATCGT TCACGAGCTA TCAAATGAGG TGAGTGTTAC AGAATACCAA
GACGGTAAGT TCATTGAGCT AGAGAGACAT TCAACTATTC CAAGTGACTT TAACGGGGAA
TCGAAATTAG CAGCAGTGAG ACTATCACAT GATGGGAAGC ACTTATATAT AAGTAATAGA
GGGCATGATA GTATTGCTAT ATTTGAAGTT TTAGAAGATG GCAGATCACT GAGAAGTATT
GAAATACAAC CAAGTTACGA TGCCTTTCCA AGAGACTTTA ATATAACTGA ATCAGATAAC
TATTTAATTT GCGCACATCA AGAAGGAGAA TCAAAAGTTT CAATTTTTGA ACGTGATAAC
ATAACTGGTA AACTTTCATT AAAAGATAAA AAAGCTATAG CAAATGAAGG TGTTTGTGTA
CTACTATAA
|
|---|
| Protein sequence | MTLGYIGSYT KKSGKGIYRF KLNDETGVIE ALETGYEIEA STYLTRNESF LYAITKEGEE
CGVASFSIKE DGQLELINKC LESKQGTGCY IQVSSNGKYL FEAVYGAGLA RIYKLNQITG
AIEKLIEELA HEFPTGSHER QDSSHVHFLN ETPDHKYVVA TDLGTDRVVT YKFGEDGLKQ
YAVSQFKNSD GPRHIAFSND GRHAYIVHEL SNEVSVTEYQ DGKFIELERH STIPSDFNGE
SKLAAVRLSH DGKHLYISNR GHDSIAIFEV LEDGRSLRSI EIQPSYDAFP RDFNITESDN
YLICAHQEGE SKVSIFERDN ITGKLSLKDK KAIANEGVCV LL
|
|---|
| |