Gene SERP1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1453 
Symbol 
ID3241206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1518624 
End bp1519721 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content31% 
IMG OID637168138 
Producthypothetical protein 
Protein accessionYP_189022 
Protein GI57867403 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5434] Endopolygalacturonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATCA ATGCAAAAGA TTTCGGATTA AAAGGAAAAA GTAAATATAA GGATACAAGA 
GCGATTCAAA AAGCATTAAA TTACGCAAAA AAAGGCAGAC ACACTGTTTA TATACCTAAA
GGAACTTATT ATATCAGAAA AGCTTTAGTT ATTTATGATT CTACAACATT GTTATTGGAA
GAAGGTGCAA CACTTTTAAG AAAAGGGAAA GATGCATTAT TAAAAAATGG TAGACGCTTA
AAGCTATATC ATGGCTATAA TGGAAATAGT CACATTTATA TTAAAGGAGG AACTTTTGAT
ATGAATGGAG GCGAATATCC ATATAATAAT ACAGCCATGT GCATGGGACA TGCAGAAGAC
ATTCAAATTT TAGGTGTAAC ATTCAAAAAT ATTGTTGGAG GGCATGCACT CGACGCATGC
GGAATCAATG GTTTACACAT ATCAGAATGT GAATTTAAAG GATTTCTTGA TATTGATGGA
GATCGTTCTT TTTCTGAAGC AGTACAATTG GACATACAAG TACCTGGTGC TTTTCCTAAA
TTTGGAACTA CAGATGGAAC GATTACGAAA AATGTTGTCA TTGAAAAATG TTATTTTGGC
TGTTCAGATC ATCCTAAAAT GAAAGCGTGG AATAGAGCTA TTGGCTCTCA TGCCAGTAGA
TATAACTGCT ATTATGAAAA CATTCATATC AATCAAAACA TCTTTGATAA TTTAAATGAG
TATGCTTTAA CTCCTCTAAA GTCAAAAGAC ACATTTATTA CAAAAAATAA ATTTATAAAT
TGTAATGGTG GAATAAGATT TCTTGGAGTG AAGGATGGTA AAAATGCTGC CGATCCTATT
ACAGGACAAG TGATGGAAAC TCAAGCTGGT GAGAATTTCA ATGTGATAGG TAATACTTTT
ATTGGTAAGA TGAAAAGAGA TGCGATTCAT ATTAGAAGTT ATCATCACGT CCAACATCAA
AACGTTTTTA TAGCGGCAAA TCAATTTGAA GATGCTTCAC AATCAATACA TTTAGAAAAT
ATTAATGGAC TTACTTTAAA TCAGGAACAA ACAAAAATCA AAATCAAGAG TATTGATGTG
AAAAACATCA GTAATTAA
 
Protein sequence
MFINAKDFGL KGKSKYKDTR AIQKALNYAK KGRHTVYIPK GTYYIRKALV IYDSTTLLLE 
EGATLLRKGK DALLKNGRRL KLYHGYNGNS HIYIKGGTFD MNGGEYPYNN TAMCMGHAED
IQILGVTFKN IVGGHALDAC GINGLHISEC EFKGFLDIDG DRSFSEAVQL DIQVPGAFPK
FGTTDGTITK NVVIEKCYFG CSDHPKMKAW NRAIGSHASR YNCYYENIHI NQNIFDNLNE
YALTPLKSKD TFITKNKFIN CNGGIRFLGV KDGKNAADPI TGQVMETQAG ENFNVIGNTF
IGKMKRDAIH IRSYHHVQHQ NVFIAANQFE DASQSIHLEN INGLTLNQEQ TKIKIKSIDV
KNISN