Gene SERP1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1416 
Symbol 
ID3242879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1480132 
End bp1480662 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content35% 
IMG OID637168101 
Productcytosolic long-chain acyl-CoA thioester hydrolase family protein 
Protein accessionYP_188985 
Protein GI57867327 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.639059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACA CAAATAGAAA AAGCAAAAAA ATGTCAGATG CTAAATGCAT CAAAACAAGA 
CAGGTATATC CACAAGATAC CAATCATCAT CACACAATGT TCGGTGGAAC TTTAATGGCA
AATATTGATG AAATAGCTGC TATTACTGCT ATGAAGCACG CTGGCAACCC AGTTGTTACT
GCATCAACAG ATTCTGTTGA CTTTTTAAGA CCTATTACAA CTGGAGATAT TTTATCATAT
GAAGCAATGG TTTCTTATGC AGGAACAAGT TCGATGGAGA TATGTGTTCA AATTGTTATT
GATGATGTTT ATAAAAACGA GCGCCACTTG GCCGCTTTAA GTTTTTTAAC TTTTGTAGCA
TTGGATAGTG ATGGAAAACC AACATCAGTA CCTGATGTTG AACCTGAAAC ATCTGTAGAA
AAATGGTTCC ATGAAACTGC GCCACAACGT GTTGCTAGAC GTAAAGAACG TCGTAAAGAA
AGTATAGATA CAATTGAATA TTTATCTAGA GTTAGACATA TCGAAAAGTA A
 
Protein sequence
MANTNRKSKK MSDAKCIKTR QVYPQDTNHH HTMFGGTLMA NIDEIAAITA MKHAGNPVVT 
ASTDSVDFLR PITTGDILSY EAMVSYAGTS SMEICVQIVI DDVYKNERHL AALSFLTFVA
LDSDGKPTSV PDVEPETSVE KWFHETAPQR VARRKERRKE SIDTIEYLSR VRHIEK