Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1399 |
Symbol | |
ID | 3242846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1463472 |
End bp | 1464422 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637168084 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
Protein accession | YP_188968 |
Protein GI | 57867294 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATTG TTAGCTTAAA TAGATTAAAT GAAATAGAAA ATGAATTAAG AAAACAATTT CCAAACGAAG AATTTAAATT TTATGACAAA GCTATAAATA TCCCTATTAA TGATAGAAAA ACTATGGACA TTTTAATAGG TTATGATGGC AAAATAGATC GTACCTTTAT TGAACATTGT ATCAACCTTA AATGGATTGG ATGGTTTGCA ACAGGTGTAA ATAATTTACC GTTAAATTAT ATTAAAGAGC GAGATATCAT TCTAACAAAT GGTAAAGGTA TACAAGCTAA ACAAGTGTCT GAATATATAA TGACATTCAT TTTGCATGAT TATAAAAAGA TGAAAACTTC CTATAGAAAT CAATTAGAAA AAAATTATGA CTCCAGAATT ACTGGTAAAA GATTAAACGA AGAGACTTTA TTATTCTTGG GAACTGGTGC GATTGCACAA AGGGCTGCTT ATTTAGCCAA AGCTTTTGGA ATGAAAGTAA TAGGGGTTAG TAAGTCAGGA AAAAATGTTG AACATTTTGA TGAAGTTTAT ACAATTGAAG AGTTAGATGA TGTTATTGAA AAGGCAAATA TTATTGTTAA TGCATTACCT GAAACAGAAG AAACAATTTA CTTATTAAAA AGAAAAGATT TCATACAAAT GGACAATAAT GCCTTATTTA TAAATGTAGG AAGAGGAACA ATTGTTGATG AGGAAGTGCT CATCAATGTA CTCAAAGATC GATTAATCAG ACATGCTTAT TTAGATGTTT TTGAAAAAGA ACCACTTAGT AAGGACAATC CTTTATATGA TTTAGATAAT GTGACCATAA CTGCTCATAT TACAGGTAAT GATTCTAATA ATAATAGAGA AGCTACGGAC ATTTTCAAAA AGAATCTTGA GCATTTTCTC AATAATTATG ATGTAATTGA GAATAAAGTA GACTTAGATT ATGGTTACTA A
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Protein sequence | MKIVSLNRLN EIENELRKQF PNEEFKFYDK AINIPINDRK TMDILIGYDG KIDRTFIEHC INLKWIGWFA TGVNNLPLNY IKERDIILTN GKGIQAKQVS EYIMTFILHD YKKMKTSYRN QLEKNYDSRI TGKRLNEETL LFLGTGAIAQ RAAYLAKAFG MKVIGVSKSG KNVEHFDEVY TIEELDDVIE KANIIVNALP ETEETIYLLK RKDFIQMDNN ALFINVGRGT IVDEEVLINV LKDRLIRHAY LDVFEKEPLS KDNPLYDLDN VTITAHITGN DSNNNREATD IFKKNLEHFL NNYDVIENKV DLDYGY
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