Gene SERP1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1397 
SymbolsspA 
ID3240839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1453570 
End bp1454418 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content32% 
IMG OID637168051 
Productglutamyl endopeptidase precursor SspA 
Protein accessionYP_188966 
Protein GI57867292 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3591] V8-like Glu-specific endopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GATTTTTATC TATATGTACA ATGACAATTG CAGCGTTAGC AACTACTACA 
ATGGTAAATA CTTCTTATGC AAAAACCGAT ACAGAAAGCC ATAATCATTC CTCACTTGGC
ACAGAAAACA AAAATGTTTT AGATATTAAT AGTTCGAGTC ATAATATCAA ACCAAGTCAA
AATAAAAGTT ACCCAAGTGT AATATTACCT AATAATAATA GACATCAAAT TTTTAATACT
ACACAAGGTC ATTATGATGC TGTTAGTTTT ATTTATATAC CAATACATGG TGGATATATG
AGTGGTTCAG GTGTTGTTGT AGGTGAAAAT GAAATATTAA CTAATAAACA CGTTGTTAAT
GGAGCTAAGG GTAATCCAAG AAATATTAGT GTCCATCCTT CAGCTAAAAA TGAAAATGAT
TATCCTAATG GCAAATTTGT GGGTCAAGAA ATCATACCGT ATCCTGGTAA TAGTGATTTA
GCAATCTTAA GAGTGTCACC AAACGAACAT AATCAACATA TTGGTCAAGT AGTTAAACCT
GCAACTATAA GTAGCAATAC AGACACTAGA ATTAATGAAA ACATCACTGT TACTGGTTAC
CCTGGTGACA AACCATTAGC CACAATGTGG GAAAGTGTAG GTAAAGTTGT CTATATTGGT
GGCGAGGAAT TAAGATATGA CCTAAGTACT GTAGGTGGAA ACTCTGGATC TCCAGTATTT
AATGGTAAAA ATCAAGTTAT TGGAATACAT TATGGTGGCG TAGATAATAA ATACAATAGC
AGTGTTTATA TTAATGATTT CGTTCAACAA TTCCTAAGAA ACAATATACC TGATATAAAT
ATTCAGTAA
 
Protein sequence
MKKRFLSICT MTIAALATTT MVNTSYAKTD TESHNHSSLG TENKNVLDIN SSSHNIKPSQ 
NKSYPSVILP NNNRHQIFNT TQGHYDAVSF IYIPIHGGYM SGSGVVVGEN EILTNKHVVN
GAKGNPRNIS VHPSAKNEND YPNGKFVGQE IIPYPGNSDL AILRVSPNEH NQHIGQVVKP
ATISSNTDTR INENITVTGY PGDKPLATMW ESVGKVVYIG GEELRYDLST VGGNSGSPVF
NGKNQVIGIH YGGVDNKYNS SVYINDFVQQ FLRNNIPDIN IQ