| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1395 |
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| Symbol | |
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| ID | 3240829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1450590 |
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| End bp | 1452047 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637168049 |
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| Product | amino acid ABC transporter, permease/amino acid-binding protein, putative |
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| Protein accession | YP_188964 |
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| Protein GI | 57867284 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTGTT TGTTCAAAAT GCTATCAATC ATAATAATAA TGTTAAGTAC TTTCACCTTA
TTCATCAGTC CGAGTACATA TGCAAATGAA GATGAAAATT GGACTAAAAT AAAAAATCGA
GGAGAACTAA GAGTTGGATT GTCAGCTGAT TATGCACCTT TAGAATTTGA AAAGACGATA
CATGGTAAAA CTGAATATGC GGGTGTAGAT ATAGAATTAG CTAAAAAGAT TGCGAAAGAT
AATCATCTAA AGCTAAAAAT TGTAAACATG CAATTTGATA GCTTATTAGG TGCACTTAAG
ACCGGTAAAA TCGATATTAT TATCTCCGGT ATGACAACAA CTCCCGAACG AAAAAAAGAA
GTGGATTTTA CAAAACCTTA CATGATTACA AATAATGTGA TGATGATTAA AAAAGATGAT
GCAAAACGTT ATCAAAACAT CAAAGATTTT GAAGGCAAAA AAATTGCTGC GCAAAAAGGG
ACAGATCAAG AAAAAATTGC ACAAACTGAG ATTGAAGATA GTAAAATTTC TTCACTCAAT
AGATTACCTG AAGCTATATT ATCTTTAAAA AGTGGAAAAG TAGCAGGTGT AGTTGTTGAA
AAACCAGTAG GTGAGGCATA TTTAAAACAA AATTCAGAAC TAACATTTTC AAAGATTAAA
TTTAATGAAG AAAAGAAACA AACATGTATA GCTGTTCCTA AGAACTCTCC TGTACTTTTA
GATAAGCTAA ATCAAACGAT TGATAATGTA AAAGAAAAAA ATTTAATTGA TCAATACATG
ACAAAAGCAG CCGAAGATAT GCAAGATGAT GGAAATTTTA TTTCTAAATA TGGCAGTTTT
TTCATTAAAG GAATTAAAAA TACTATTTTG ATTTCATTAG TAGGTGTGGT ATTGGGGTCT
ATTTTAGGCT CTTTTATAGC TTTATTAAAA ATAAGTAAAA TTAGACCATT ACAATGGATA
GCAAGTATAT ACATAGAATT TTTAAGAGGT ACTCCTATGC TTGTGCAAGT GTTTATTGTA
TTTTTTGGGA CTACTGCAGC TTTGGGGTTA GATATTTCAG CTTTAATTTG TGGTACTATT
GCGCTTGTTA TAAATTCTTC AGCCTACATT GCCGAGATTA TTAGAGCTGG TATTAATGCT
GTAGATAAAG GACAAACTGA AGCTGCTAGA AGTTTAGGAT TGAATTATAG ACAGACTATG
CAATCAGTAG TTATGCCACA GGCAATTAAG AAAATTTTAC CTGCATTAGG TAATGAATTT
GTAACCTTGA TTAAAGAATC GTCTATAGTT TCCACAATTG GAGTGAGTGA AATCATGTTT
AATGCACAAG TTGTACAAGG GATATCTTTT GATCCTTTCA CACCATTGTT AGTTGCAGCA
TTACTATATT TCTTACTTAC ATTTGCACTT ACACGTGTTA TGAATTTTAT TGAAGGGAGA
ATGAGTGCCA GTGATTAA
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| Protein sequence | MKCLFKMLSI IIIMLSTFTL FISPSTYANE DENWTKIKNR GELRVGLSAD YAPLEFEKTI
HGKTEYAGVD IELAKKIAKD NHLKLKIVNM QFDSLLGALK TGKIDIIISG MTTTPERKKE
VDFTKPYMIT NNVMMIKKDD AKRYQNIKDF EGKKIAAQKG TDQEKIAQTE IEDSKISSLN
RLPEAILSLK SGKVAGVVVE KPVGEAYLKQ NSELTFSKIK FNEEKKQTCI AVPKNSPVLL
DKLNQTIDNV KEKNLIDQYM TKAAEDMQDD GNFISKYGSF FIKGIKNTIL ISLVGVVLGS
ILGSFIALLK ISKIRPLQWI ASIYIEFLRG TPMLVQVFIV FFGTTAALGL DISALICGTI
ALVINSSAYI AEIIRAGINA VDKGQTEAAR SLGLNYRQTM QSVVMPQAIK KILPALGNEF
VTLIKESSIV STIGVSEIMF NAQVVQGISF DPFTPLLVAA LLYFLLTFAL TRVMNFIEGR
MSASD
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