Gene SERP1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1379 
Symbol 
ID3242870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1434373 
End bp1437312 
Gene Length2940 bp 
Protein Length979 aa 
Translation table11 
GC content29% 
IMG OID637168033 
Producthypothetical protein 
Protein accessionYP_188948 
Protein GI57867318 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0280603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTA AATCATTAGA AATATACGGA TATGGCCAAT TTGTTCAACG TAAAATTGAA 
TTTAATCGTC AATTTACTGA GATATTTGGT GAGAATGAAG CTGGTAAATC TACTATTCAA
GCATTTATTC ACTCTATTTT GTTCGGATTT CCTACTAAAA AGTCCAAAGA ACCACGTTTA
GAACCAAGAT TAGGTAATCA ATATGGTGGG AAATTATCAC TCATTTTCGA CGATGGCATT
GAAGCAGAGG TTGAGAGAAT CAAGGGAAGT GCTCATGGAG ATGTCAAAAT TTATCTTAAA
GATGGTACTA TTCGAGATGA AGTTTGGCTA AATAAAAAAC TTAATTACAT TTCAAAGAAA
ACATATCAAG GTATATTCTC TTTTGATGTT TTAGGTCTTC AAGATATTCA TAAAAATCTA
GATGAAGAGC AACTACAAGA TTATTTATTA GAAGCAGGTG CACTTGGATC AACTGAATTT
ACAAGTATGA GAGATAGAAT TGGACAAAAG AAAGAAGAAT TATATAAAAA ATCTGGAAAA
AATCCAATTA TTAATCAACA AATTGAGCAA CTTAAACAAT TAGAAAATCA AATTCGAAAT
GAAGAAAGTA AACTTGATAC ATATCATCGA CTTGTAGACG ATAAAGATAA ATCATCAAGA
AGACTAGAAA ATTTGAAGCA AAATTTAAAT CAATTATCAA AAATGCATGA GCAAAAACAA
AAAGAGGTTG CTCTACACGA TCAAACACAA GAATGGAAAA GGTTAGAACA GTCGCTTAAT
ATAGAGCCTA TAAATTTTCC TGAAAAAGGG ATAGATAGAT ACGAAACTGC TAAATCTCAC
AAACAATCAC TTGAACGAGA TAAAAGTTTG CGAGAAGAAA GATTAAGCAT ATTAAATAAA
GAGGCGGAGT CCATCAATCC AGTAGACCAA AAGTATATTG ATTCGTTTAA TAGCCTTTAT
CAACAAGAGA CTGAAATTAA ACAAAAAGAA TTTGAGTTAC GTTCAATAGA GAAAGATATT
GCTGATAAGC AACGTGAACT AGAAGCTCTT CAATCTAATA TAGGTTGGCA AGAAGTGTTT
TACGACACAG ACAGTACTGA AGCGATGAAA AGTCATATGA GTGATTTAGT ATTAGGCAAG
CAAGAACAAA TTGCTTATAT CAATCAGTTA GAACGTGGAC TTGAAGAAAA TAAAATTGAA
AGAAACTCTA ATTCTAATGA GATTAATCAA GTTGAGAATG AGCTTGTTCC TGACGAAACC
TTTGAAAAGA AAAAGGAATA TACACAACAA GTTTTAGAAT TACATGAAAA AGAGAACTTG
TATGAAAAGT TAAAAGAAAC TTTTGAAGAA GAACAAACAC AAAAAAATAA AAGACAAAAG
TTTTTGAGAA TAGGATTTAT TGTTTTGACT ATTCTATCAG CAGCACTTTC TATTTTTTCT
TTTTTCACTG CAAATCTTAT TTTTGGTATA ATATTTGCTC TATTAACTGT GATTTTTGTA
GTAGGTATCA TTTTTTCTAG ATCTAAAGCA GTAGATTATA GCACAGCAAT AAGTCAGGAA
ATTAATGATT TAGAAAACCA ACTCACGCAA CTTGAAAAAG AATATAATCT TGACTTCGAT
TTAGAATATC AACAACAAGT TCGTGAACAA TGGCGTCATG CTAAAAAAAA TAAAAAAATA
CTTGAAGAAA AACATCAATA TATCAATCAA TCATTAACGA CTGCAAATGA GCGATTAGAT
AGTTTAAAAC ATAGCATTAT TGAAATAAAA AAAGAGTTAC GTTTATCAGA AAAACTTTCT
GATGAATTAG TGGTTGAAAG TATCTCAACC ATTGGTCAAA TTAAAGCGCA TGATAAATAC
ATTATTGATT TAAATCAACA ACGCAATAAT CTGCTAAAAG ATATCAATCA CTTTTATGAA
CGTGCACAAT CTGTAACTGA ACCACATTTA AAACTATTTA ATCAGATGTC TTTCTTCCAT
GATGTGAAAC AGTGGTTAAA AAATGCAGAA GAACAAAATG AGGCTTGGAA TAAAAATCAA
ACTGAAACGC AATTACTCAA TAATGAATTA AAGCAATTGA AGTCACGCTT AAGTGAAACG
AATCAAATGA TTAAGCAATT ATTTGATTAT GTTGATGTAG ATAATGAAGA AGATTATTAT
ACACATCATC ATCATTTTGA AACATATCAA AGTGATTTAA ATCGATTTAA TGATTTAAAT
CAATATTTAG AAAATCAAAA TTACACTTAT GAAATGAGTT CGCAATTAAG TGAGAAAACT
ACTGCTCAAC TAGAAGAAGA AGATCATAGA TTGGCTAAAC AAGTTGACGA TTACAATGAT
CAATTTTTAG AAATGCAAGC AGAAGTTAGT GATTTAAATG CTCAGATTAA TCATATGGAA
ACAGATAGAA CTTTAGCACA ATTAAGACAT GAATATTATA GCTTAAAAAA TAGACTTAAC
GATATTGCTA AGGATTGGGC AAGCTTAAGT TATATGCAAG CTTTAGTGGA AGAACATATC
AAGCAAATAA AAGATAAGCG TCTACCACAA GTGATTAATG AAGCTGTATC TATTTTTAAA
AATTTAACAA ATGGTACTTA CAATATGATT CATTATACTG AAAATCATAA AATACATGTA
AAGCATTCTA ACGGACAAGT ATTTGAGCCA GTTGAGTTGA GTCAATCTAC AAAAGAATTA
TTATATGTGG CTTTACGTAT TAGTCTTATT AAAGTATTAA AACCGTATTA TCCATTCCCA
GTGATTGTAG ATGATGCATT TGTTCATTTT GATAAATATC GTAAAGAACG TATGTTGAAA
TATTTGAGAG AACTATCAGA ACATTATCAA ATACTTTATT TTACTTGTAC AAAAGATCAT
GTCATACCGG CTAAAGAAGT ATTAACTTTA AATAAATTAC AGGAAGGCGG GAAAAAATGA
 
Protein sequence
MIIKSLEIYG YGQFVQRKIE FNRQFTEIFG ENEAGKSTIQ AFIHSILFGF PTKKSKEPRL 
EPRLGNQYGG KLSLIFDDGI EAEVERIKGS AHGDVKIYLK DGTIRDEVWL NKKLNYISKK
TYQGIFSFDV LGLQDIHKNL DEEQLQDYLL EAGALGSTEF TSMRDRIGQK KEELYKKSGK
NPIINQQIEQ LKQLENQIRN EESKLDTYHR LVDDKDKSSR RLENLKQNLN QLSKMHEQKQ
KEVALHDQTQ EWKRLEQSLN IEPINFPEKG IDRYETAKSH KQSLERDKSL REERLSILNK
EAESINPVDQ KYIDSFNSLY QQETEIKQKE FELRSIEKDI ADKQRELEAL QSNIGWQEVF
YDTDSTEAMK SHMSDLVLGK QEQIAYINQL ERGLEENKIE RNSNSNEINQ VENELVPDET
FEKKKEYTQQ VLELHEKENL YEKLKETFEE EQTQKNKRQK FLRIGFIVLT ILSAALSIFS
FFTANLIFGI IFALLTVIFV VGIIFSRSKA VDYSTAISQE INDLENQLTQ LEKEYNLDFD
LEYQQQVREQ WRHAKKNKKI LEEKHQYINQ SLTTANERLD SLKHSIIEIK KELRLSEKLS
DELVVESIST IGQIKAHDKY IIDLNQQRNN LLKDINHFYE RAQSVTEPHL KLFNQMSFFH
DVKQWLKNAE EQNEAWNKNQ TETQLLNNEL KQLKSRLSET NQMIKQLFDY VDVDNEEDYY
THHHHFETYQ SDLNRFNDLN QYLENQNYTY EMSSQLSEKT TAQLEEEDHR LAKQVDDYND
QFLEMQAEVS DLNAQINHME TDRTLAQLRH EYYSLKNRLN DIAKDWASLS YMQALVEEHI
KQIKDKRLPQ VINEAVSIFK NLTNGTYNMI HYTENHKIHV KHSNGQVFEP VELSQSTKEL
LYVALRISLI KVLKPYYPFP VIVDDAFVHF DKYRKERMLK YLRELSEHYQ ILYFTCTKDH
VIPAKEVLTL NKLQEGGKK