Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1379 |
Symbol | |
ID | 3242870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1434373 |
End bp | 1437312 |
Gene Length | 2940 bp |
Protein Length | 979 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637168033 |
Product | hypothetical protein |
Protein accession | YP_188948 |
Protein GI | 57867318 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0280603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATTA AATCATTAGA AATATACGGA TATGGCCAAT TTGTTCAACG TAAAATTGAA TTTAATCGTC AATTTACTGA GATATTTGGT GAGAATGAAG CTGGTAAATC TACTATTCAA GCATTTATTC ACTCTATTTT GTTCGGATTT CCTACTAAAA AGTCCAAAGA ACCACGTTTA GAACCAAGAT TAGGTAATCA ATATGGTGGG AAATTATCAC TCATTTTCGA CGATGGCATT GAAGCAGAGG TTGAGAGAAT CAAGGGAAGT GCTCATGGAG ATGTCAAAAT TTATCTTAAA GATGGTACTA TTCGAGATGA AGTTTGGCTA AATAAAAAAC TTAATTACAT TTCAAAGAAA ACATATCAAG GTATATTCTC TTTTGATGTT TTAGGTCTTC AAGATATTCA TAAAAATCTA GATGAAGAGC AACTACAAGA TTATTTATTA GAAGCAGGTG CACTTGGATC AACTGAATTT ACAAGTATGA GAGATAGAAT TGGACAAAAG AAAGAAGAAT TATATAAAAA ATCTGGAAAA AATCCAATTA TTAATCAACA AATTGAGCAA CTTAAACAAT TAGAAAATCA AATTCGAAAT GAAGAAAGTA AACTTGATAC ATATCATCGA CTTGTAGACG ATAAAGATAA ATCATCAAGA AGACTAGAAA ATTTGAAGCA AAATTTAAAT CAATTATCAA AAATGCATGA GCAAAAACAA AAAGAGGTTG CTCTACACGA TCAAACACAA GAATGGAAAA GGTTAGAACA GTCGCTTAAT ATAGAGCCTA TAAATTTTCC TGAAAAAGGG ATAGATAGAT ACGAAACTGC TAAATCTCAC AAACAATCAC TTGAACGAGA TAAAAGTTTG CGAGAAGAAA GATTAAGCAT ATTAAATAAA GAGGCGGAGT CCATCAATCC AGTAGACCAA AAGTATATTG ATTCGTTTAA TAGCCTTTAT CAACAAGAGA CTGAAATTAA ACAAAAAGAA TTTGAGTTAC GTTCAATAGA GAAAGATATT GCTGATAAGC AACGTGAACT AGAAGCTCTT CAATCTAATA TAGGTTGGCA AGAAGTGTTT TACGACACAG ACAGTACTGA AGCGATGAAA AGTCATATGA GTGATTTAGT ATTAGGCAAG CAAGAACAAA TTGCTTATAT CAATCAGTTA GAACGTGGAC TTGAAGAAAA TAAAATTGAA AGAAACTCTA ATTCTAATGA GATTAATCAA GTTGAGAATG AGCTTGTTCC TGACGAAACC TTTGAAAAGA AAAAGGAATA TACACAACAA GTTTTAGAAT TACATGAAAA AGAGAACTTG TATGAAAAGT TAAAAGAAAC TTTTGAAGAA GAACAAACAC AAAAAAATAA AAGACAAAAG TTTTTGAGAA TAGGATTTAT TGTTTTGACT ATTCTATCAG CAGCACTTTC TATTTTTTCT TTTTTCACTG CAAATCTTAT TTTTGGTATA ATATTTGCTC TATTAACTGT GATTTTTGTA GTAGGTATCA TTTTTTCTAG ATCTAAAGCA GTAGATTATA GCACAGCAAT AAGTCAGGAA ATTAATGATT TAGAAAACCA ACTCACGCAA CTTGAAAAAG AATATAATCT TGACTTCGAT TTAGAATATC AACAACAAGT TCGTGAACAA TGGCGTCATG CTAAAAAAAA TAAAAAAATA CTTGAAGAAA AACATCAATA TATCAATCAA TCATTAACGA CTGCAAATGA GCGATTAGAT AGTTTAAAAC ATAGCATTAT TGAAATAAAA AAAGAGTTAC GTTTATCAGA AAAACTTTCT GATGAATTAG TGGTTGAAAG TATCTCAACC ATTGGTCAAA TTAAAGCGCA TGATAAATAC ATTATTGATT TAAATCAACA ACGCAATAAT CTGCTAAAAG ATATCAATCA CTTTTATGAA CGTGCACAAT CTGTAACTGA ACCACATTTA AAACTATTTA ATCAGATGTC TTTCTTCCAT GATGTGAAAC AGTGGTTAAA AAATGCAGAA GAACAAAATG AGGCTTGGAA TAAAAATCAA ACTGAAACGC AATTACTCAA TAATGAATTA AAGCAATTGA AGTCACGCTT AAGTGAAACG AATCAAATGA TTAAGCAATT ATTTGATTAT GTTGATGTAG ATAATGAAGA AGATTATTAT ACACATCATC ATCATTTTGA AACATATCAA AGTGATTTAA ATCGATTTAA TGATTTAAAT CAATATTTAG AAAATCAAAA TTACACTTAT GAAATGAGTT CGCAATTAAG TGAGAAAACT ACTGCTCAAC TAGAAGAAGA AGATCATAGA TTGGCTAAAC AAGTTGACGA TTACAATGAT CAATTTTTAG AAATGCAAGC AGAAGTTAGT GATTTAAATG CTCAGATTAA TCATATGGAA ACAGATAGAA CTTTAGCACA ATTAAGACAT GAATATTATA GCTTAAAAAA TAGACTTAAC GATATTGCTA AGGATTGGGC AAGCTTAAGT TATATGCAAG CTTTAGTGGA AGAACATATC AAGCAAATAA AAGATAAGCG TCTACCACAA GTGATTAATG AAGCTGTATC TATTTTTAAA AATTTAACAA ATGGTACTTA CAATATGATT CATTATACTG AAAATCATAA AATACATGTA AAGCATTCTA ACGGACAAGT ATTTGAGCCA GTTGAGTTGA GTCAATCTAC AAAAGAATTA TTATATGTGG CTTTACGTAT TAGTCTTATT AAAGTATTAA AACCGTATTA TCCATTCCCA GTGATTGTAG ATGATGCATT TGTTCATTTT GATAAATATC GTAAAGAACG TATGTTGAAA TATTTGAGAG AACTATCAGA ACATTATCAA ATACTTTATT TTACTTGTAC AAAAGATCAT GTCATACCGG CTAAAGAAGT ATTAACTTTA AATAAATTAC AGGAAGGCGG GAAAAAATGA
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Protein sequence | MIIKSLEIYG YGQFVQRKIE FNRQFTEIFG ENEAGKSTIQ AFIHSILFGF PTKKSKEPRL EPRLGNQYGG KLSLIFDDGI EAEVERIKGS AHGDVKIYLK DGTIRDEVWL NKKLNYISKK TYQGIFSFDV LGLQDIHKNL DEEQLQDYLL EAGALGSTEF TSMRDRIGQK KEELYKKSGK NPIINQQIEQ LKQLENQIRN EESKLDTYHR LVDDKDKSSR RLENLKQNLN QLSKMHEQKQ KEVALHDQTQ EWKRLEQSLN IEPINFPEKG IDRYETAKSH KQSLERDKSL REERLSILNK EAESINPVDQ KYIDSFNSLY QQETEIKQKE FELRSIEKDI ADKQRELEAL QSNIGWQEVF YDTDSTEAMK SHMSDLVLGK QEQIAYINQL ERGLEENKIE RNSNSNEINQ VENELVPDET FEKKKEYTQQ VLELHEKENL YEKLKETFEE EQTQKNKRQK FLRIGFIVLT ILSAALSIFS FFTANLIFGI IFALLTVIFV VGIIFSRSKA VDYSTAISQE INDLENQLTQ LEKEYNLDFD LEYQQQVREQ WRHAKKNKKI LEEKHQYINQ SLTTANERLD SLKHSIIEIK KELRLSEKLS DELVVESIST IGQIKAHDKY IIDLNQQRNN LLKDINHFYE RAQSVTEPHL KLFNQMSFFH DVKQWLKNAE EQNEAWNKNQ TETQLLNNEL KQLKSRLSET NQMIKQLFDY VDVDNEEDYY THHHHFETYQ SDLNRFNDLN QYLENQNYTY EMSSQLSEKT TAQLEEEDHR LAKQVDDYND QFLEMQAEVS DLNAQINHME TDRTLAQLRH EYYSLKNRLN DIAKDWASLS YMQALVEEHI KQIKDKRLPQ VINEAVSIFK NLTNGTYNMI HYTENHKIHV KHSNGQVFEP VELSQSTKEL LYVALRISLI KVLKPYYPFP VIVDDAFVHF DKYRKERMLK YLRELSEHYQ ILYFTCTKDH VIPAKEVLTL NKLQEGGKK
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