| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1378 |
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| Symbol | cbf1 |
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| ID | 3242869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1433435 |
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| End bp | 1434376 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637168032 |
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| Product | 3'-5' exoribonuclease YhaM |
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| Protein accession | YP_188947 |
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| Protein GI | 57867317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3481] Predicted HD-superfamily hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.280441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAATG TAGAAAAATT AAATCCCGGC GACTCAGTGG ATCATTTTTT CTTGATCCAT
CGTGCAACTC AAGGTGTTAC AGCTCAGGGT AAAGATTACA TGACACTATT TCTGCAAGAT
AAAAGTGGTG ATATTGAAGC TAAATTATGG ACTGCTACGA AAGATGATAT GCAAACTTTA
AAACCAGAAA CAATAGTTCA TGTCAAAGGT GATATCATCA ATTATCGTGG ACGCAAACAG
ATGAAAATAC ATCAAATACG TCTTGCACAA GCTGAAGACA AAGTGTCAAC TAAAGACTTT
GTTGACGGTG CGCCAATGTC ACCTACAGAA ATACAAGAGG AATTATCGCA TTTTATGTTA
GATATTGAAA ATGCTAACTT ACAACGCATT ACTAGACATT TAATTAAAAA GTATCAAGAT
CGTTTTTTCA CTTATCCAGC AGCTAGTTCT CATCATCATA ATTTCGCGAG TGGATTGAGT
TATCATGTTT TAACAATGTT GCGTATAGCA AAATCTGTAT GTGATATTTA TCCTCTGTTG
AATAGAAGTC TATTATATAG TGCTATCATT TTGCATGATT TAGGTAAAGT AAGAGAATTG
AGTGGTCCAG TGGCGACGAC CTATACTGTT GAAGGAAATT TACTTGGTCA TATCTCTATA
GCAAGTGATG AAGTTGCTGA AACAGCCAAA GAGTTAGGCA TTGATGGAGA AGAGGTTATG
TTACTTAGAC ATATGATTTT AGCGCATCAT GGTAAAATGG AGTTTGGATC GCCTAAATTG
CCTCATTTAA AGGAAGCTGA AATACTTTAC TTTATAGATA ATATTGATGC TAAAATGAAC
ATGTTTGATA AAGCTTTCAA AAAAACAGAA AAAGGTCAAT TTACAGAAAG AATTTTTGGT
TTAGAAAATA GACAATTTTA TAATCCAACA ACACTTGATT AA
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| Protein sequence | MRNVEKLNPG DSVDHFFLIH RATQGVTAQG KDYMTLFLQD KSGDIEAKLW TATKDDMQTL
KPETIVHVKG DIINYRGRKQ MKIHQIRLAQ AEDKVSTKDF VDGAPMSPTE IQEELSHFML
DIENANLQRI TRHLIKKYQD RFFTYPAASS HHHNFASGLS YHVLTMLRIA KSVCDIYPLL
NRSLLYSAII LHDLGKVREL SGPVATTYTV EGNLLGHISI ASDEVAETAK ELGIDGEEVM
LLRHMILAHH GKMEFGSPKL PHLKEAEILY FIDNIDAKMN MFDKAFKKTE KGQFTERIFG
LENRQFYNPT TLD
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