| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1358 |
|---|
| Symbol | menE |
|---|
| ID | 3241459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1414258 |
|---|
| End bp | 1415682 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637168006 |
|---|
| Product | O-succinylbenzoic acid--CoA ligase |
|---|
| Protein accession | YP_188929 |
|---|
| Protein GI | 57867277 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0273591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTTT GGTTACAGGA ACAAGCTCAA TCAAATGGAA ATCGATTAGC GATTGTTACA
AATCAGTTAT CTTTAACGTA CGAAGAATTA TATCATCGTG CAAAAACAAT CGCGGAATAT
TTAACTTCTT TAAATCAGAA AAGGATTGGT TTATATATAA GCAATGATAT TGATTCAGTT
GTTTTGATTC ATGCTTGTTG GTTAGCTCAT ATTGAAATAG CTATGATAAA TACACGTTTA
ACGCGACATG AGATGATAAA TCAAATGAAT TCAGTCGACA TAGCAACGAT TGTACACACG
TTGCCTTTAG AATTAGAAGG GTTTAATTTA TATCATTTTA ATGATTTAAC ACAATTAGAT
AAACATGATG TTTCAGGTTA CAAATTTAAT TTAGAATCGA TTGCATCAAT TATGTTTACG
TCTGGAACGA CGGGACCTCA AAAAGCTGTG CCTCAAACGT TTAATAATCA TTTAGCCAGT
GCTAAAGGCT GTAAACAAAG TTTAGGATTC GAACAAAATA CTGTGTGGCT TTCGGTCTTA
CCTATATATC ATATTTCTGG GCTCAGTGTT ATTTTGCGCG CAGTGATAGA AGGATTCACT
GTCAGACTTG TTAAAAAGTT TCAAACTGAT GATATGTTAA CACAAATAAA GACTTATCCA
ATCACCCATA TGTCCCTTGT TCCACAAACG TTAAAGTGGT TAATGGATGC AGGATTGACT
CAACCATTTT CTTTAGAAAA AATTCTGCTA GGTGGTGCTA AATTATCACC ACAATTAATT
GAGCAAGCAT TGACTTATCG TTTACCTGTA TATAATTCTT TTGGTATGAC AGAAACTTGC
TCTCAGTTTC TAACAGCCTC ACCTCAAATG CTCAAAGAAC GTTTCGATAC TGTTGGAAAA
CCAAGTGAAA ATGTCGAAGT GAAAATAAAA AATCCCAACG CATATGGACA TGGAGAGTTA
TTAATTAAAG GTGAAAATGT GATGAATGGT TATTTATATC CCAAATATTT AAAAGACACA
TTTGATAATG ATGGGTATTT TCAAACTGGA GATATAGCTG AAATAGATGA TGAAGGTTAC
GTCATAATAT ATGATCGGCG CAAAGATTTG ATTATAAGTG GTGGAGAGAA TATTTATCCT
TACCAAATTG AAACAATCGC AAAAGACTTT GAAGGCATTG AAGATGCCGT ATGTGTAGGA
ATATCAGATG ATACTTGGGG TCAAGTACCA ATATTATATT ATGTGACAAA TCAAGATATT
AATCAAACTG AATTAATAGA ACATTTTGAG AATCATTTAG CTAGATATAA AATTCCTAAA
AAATATTATC AGGTCAAATC TTTACCTTAT ACATCGACAG GTAAATTACA ACGTAAAAAG
GTCAAAAGTG AAGACTTGAA TGAGGGAAAG AATAATGAAA GTTAA
|
|---|
| Protein sequence | MNFWLQEQAQ SNGNRLAIVT NQLSLTYEEL YHRAKTIAEY LTSLNQKRIG LYISNDIDSV
VLIHACWLAH IEIAMINTRL TRHEMINQMN SVDIATIVHT LPLELEGFNL YHFNDLTQLD
KHDVSGYKFN LESIASIMFT SGTTGPQKAV PQTFNNHLAS AKGCKQSLGF EQNTVWLSVL
PIYHISGLSV ILRAVIEGFT VRLVKKFQTD DMLTQIKTYP ITHMSLVPQT LKWLMDAGLT
QPFSLEKILL GGAKLSPQLI EQALTYRLPV YNSFGMTETC SQFLTASPQM LKERFDTVGK
PSENVEVKIK NPNAYGHGEL LIKGENVMNG YLYPKYLKDT FDNDGYFQTG DIAEIDDEGY
VIIYDRRKDL IISGGENIYP YQIETIAKDF EGIEDAVCVG ISDDTWGQVP ILYYVTNQDI
NQTELIEHFE NHLARYKIPK KYYQVKSLPY TSTGKLQRKK VKSEDLNEGK NNES
|
|---|
| |