Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1354 |
Symbol | |
ID | 3241455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1411712 |
End bp | 1412497 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168002 |
Product | hypothetical protein |
Protein accession | YP_188925 |
Protein GI | 57867273 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.341852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGATTTTA TTAAGGAAAA GCGCATGCCA ATCGAATATG AAACTCATTT TTTTAATGAA GTAACATATC TTGTAGATTA TTTAAAAGTC AAGGCTCTGA TGATGATTCC GAAAAATAAA AAAGATATCA AACGTATCGT TATATACTTA AGAGGTGGTA AAGGGCAAGT TGGAAGAGTG AGAGCTGCAA GACTTATGCA ATTTGCAAAT GAATATACTT TAGTTATAGG TCCTTACTAT AGAGGAAATA ATGGAAGTGA AGGAAGAGAT GAATTTTACC GCGGTGATTT AAATGATGTA ACGCATTTGA TTCGACTTTT AAATCAAAAC TATCCTTCTG CATTTATACA TATGGTAGGA TTTTCACGTG GAGGTCTACA AGGATTACTT ACTTTTAATG ATTTGCCTGT AGATAGTTAT ATGATTTGGG GTGGCGTATC TGATATACAT TTAATGTATG AAGAACGAGT TGACTTGAGA GGTATGCTAC GACGAATGGT TGGACATCCA AAAAAAGATG CGAAAGCTTA TAAAAGCAGA GATGCAATGC AATTTATAAA AAAAGATAGT CCTCCTATTC TCATTATTCA TGGTGGCAAA GATATTCAAG TTGGAATACA TCAAGCTTAT GATTTAGAAA AAAAATTAAA ATCCAAAGGA ATTTATTATC AAACCTATTA TCAATTGGAT GAAGGTCATG TACCACGACC TCCTGCGATG AGAGACGTAA TTCGATATAT ACATCAATGG ATGAACGACG TCGAAAATAA AAATTTAAAT ATATAG
|
Protein sequence | MDFIKEKRMP IEYETHFFNE VTYLVDYLKV KALMMIPKNK KDIKRIVIYL RGGKGQVGRV RAARLMQFAN EYTLVIGPYY RGNNGSEGRD EFYRGDLNDV THLIRLLNQN YPSAFIHMVG FSRGGLQGLL TFNDLPVDSY MIWGGVSDIH LMYEERVDLR GMLRRMVGHP KKDAKAYKSR DAMQFIKKDS PPILIIHGGK DIQVGIHQAY DLEKKLKSKG IYYQTYYQLD EGHVPRPPAM RDVIRYIHQW MNDVENKNLN I
|
| |