Gene SERP1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1326 
SymbolribBA 
ID3241713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1386910 
End bp1388091 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content35% 
IMG OID637167975 
Product3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 
Protein accessionYP_188898 
Protein GI57867216 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.215807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCG ATACAATTGA GTTGGCTATA GAGGCTTTAA GAAATGGAGA GAGCATTATT 
GTAGTTGACG ATGAAGATAG AGAAAATGAA GGAGATCTTG TAGCTGTTAC GGAATGGATG 
GATGATAATA CCATTAATTT TATGGCTAGA GAGGGTCGTG GTCTGATTTG TGCACCAATT 
GATAAATCTA TAGCTGAAAG ATTAAAACTA CAATCTATGG AGCAAAATAA CACTGATATT 
TATGGCACAC ATTTTACTGT AAGCATTGAT CATTATAAAA CTACTACAGG AATCAGTGCA 
CATGAACGTA CACAAACGGC TAGAGCACTC ATAGATGAAA ATACTAATCC TGAAGATTTT 
CATCGTCCGG GGCACTTATT TCCACTTATA GCAAAAGAGA ATGGTGTGTT AACACGTAAT 
GGTCATACTG AAGCTGCCGT AGATTTGGCA CGGTTAACAG GAGCACAACC AGCTGGAGTA 
ATCTGCGAAA TTATGAATGA TGATGGGACA ATGGCTAAGG GTGAAGATCT CCAGTCATTT 
AAAGAACGCC ACCATTTAAA AATGATTACT ATAAAAAGTT TGGTTGCTTT TCGTAAGGCT 
GTTGAACTTA ATGTTAATCT TAAGGCAAAG GTCAAGATGC CAACAGATTT TGGTCATTTT 
GATATGTATG GATTTACAAC GAATTATAGC GATGAAGAAA TCGTTGCTAT TGTTAAAGGA 
GATTTAAAAA GCAATCCTAA TGTACGTATG CATTCTGCTT GTCTGACTGG GGATATTTTT 
CATAGTCAAA GATGTGATTG CGGGGCACAA CTTGAAGCGT CAATGAAATA TATTGACGAA 
CATGGTGGAA TGATTATTTA TTTACCTCAA GAAGGTAGAG GAATAGGGTT AATTAATAAG 
TTGCGCGCAT ATGAGTTGAT AGAAAAAGGT TATGATACAG TTACTGCAAA TCTTGCTCTT 
GGTTTTGATG AGGATTTGAG AGATTATCAT GTTGCAGCTG AAATATTAAA GTATTTTGAT 
ATAAGTGAAA TTAACTTGCT CAGCAATAAT CCTAAAAAAT TTGAAGGTTT AGAAGATTAC 
GGCATTGAGA TCGTAGATAG AATTGAACTT ATCGTTCCAG AAACACAATA TAACCATAGT 
TATATGGAAA CTAAAAAAAA TAAAATGGGA CATTTAATAT AG
 
Protein sequence
MQFDTIELAI EALRNGESII VVDDEDRENE GDLVAVTEWM DDNTINFMAR EGRGLICAPI 
DKSIAERLKL QSMEQNNTDI YGTHFTVSID HYKTTTGISA HERTQTARAL IDENTNPEDF 
HRPGHLFPLI AKENGVLTRN GHTEAAVDLA RLTGAQPAGV ICEIMNDDGT MAKGEDLQSF 
KERHHLKMIT IKSLVAFRKA VELNVNLKAK VKMPTDFGHF DMYGFTTNYS DEEIVAIVKG 
DLKSNPNVRM HSACLTGDIF HSQRCDCGAQ LEASMKYIDE HGGMIIYLPQ EGRGIGLINK 
LRAYELIEKG YDTVTANLAL GFDEDLRDYH VAAEILKYFD ISEINLLSNN PKKFEGLEDY 
GIEIVDRIEL IVPETQYNHS YMETKKNKMG HLI